DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cog4 and cog4

DIOPT Version :10

Sequence 1:NP_609413.1 Gene:Cog4 / 34442 FlyBaseID:FBgn0032258 Length:776 Species:Drosophila melanogaster
Sequence 2:XP_031755720.1 Gene:cog4 / 100145689 XenbaseID:XB-GENE-6085196 Length:772 Species:Xenopus tropicalis


Alignment Length:788 Identity:303/788 - (38%)
Similarity:474/788 - (60%) Gaps:41/788 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SVLEQLGALDIGTNEQVDETLQRIADEEAKVNEKLESLLAKQCQIEAKMSGIGRSLSLLHTVDSD 66
            |||.......:...:.:.|..:|:..||..|..:|.:||.:|..:|.||..:.|....|..::.|
 Frog    13 SVLSMEHVRSLTDLQDLKEAYERLCAEEKDVESELLTLLGQQTIVEKKMLALQRMGPNLQLIEGD 77

  Fly    67 SNKLNDQIVNTAQLAESVSAKVRRLDLARCRASECQQRVHDLIDLHLCSQGVVKAIGEEDYEKSA 131
            :.:|:..|..|..|||:||:|||:||||:.|..:..||..|::||..|..||..|:..||||::|
 Frog    78 AQQLSGMITFTCNLAENVSSKVRQLDLAKSRLYQAIQRADDILDLKFCMDGVQTAMKNEDYEQAA 142

  Fly   132 THIARFLAMDQQLLRRTADDVQGSITSVSDAVKTLEDATEKTRVLIAKRFDEAVKADDLASVERF 196
            .||.|:|.:|:.::..:....:|:|...:  :..|::|.:..:|:::::||.|.|:.||..||||
 Frog   143 AHIHRYLCLDKSVIELSRQGKEGNIIEAN--LHHLQEAEQHLKVVVSEKFDAATKSGDLPQVERF 205

  Fly   197 FKIFPLVGCHRTGIEKFSLYICQKLANKAQKELRNAQDIAKAESRLQLAYADRLTAILENFARVV 261
            ||||||:|.|..||.|||.|:|:::|.||::.|:.|......|.|..|.:||.||.:.|..||:|
 Frog   206 FKIFPLLGLHEEGISKFSGYLCKQVAKKAEENLQLALGTEGGERRAALIFADTLTLLFEGIARIV 270

  Fly   262 EVNQPIIEAFYGQASSSLIDMVSILQHECDTEVKNLLMEFNKNRQIQYRSKQVNESTQRSAGGGN 326
            |.:|||:|.:||  ...|..::..||.|||.:|:.::.:|.::|....:.:||.....|      
 Frog   271 ETHQPILETYYG--PGRLYMLIKHLQAECDRQVEKVVDKFVQHRDYHRKFQQVQSCMMR------ 327

  Fly   327 LGSNSIQALGHYRKPSGGSVDKLNPKEIDAIIAEITVMHARVELYFRFMRRRLQVHVE---TCVP 388
                            |.|.||:.|:::|.|::|:|:|.||.|||.||::||:....|   :...
 Frog   328 ----------------GSSTDKIEPRDLDPILSEVTLMSARTELYLRFIKRRVVSDFEVGDSMAT 376

  Fly   389 EKEQFDIMERYEKIMKNSDLRRQMQEILSTYLLLERYFMEESVLKAIGLDTYESGQQCSSMVDDV 453
            |:.:.:.::..:|::|:..|...:||::..|:.:|.::|.|||.||:.:||.|.||..|||||||
 Frog   377 EEVKQEHLQNLDKLIKHCLLSCSVQELIGYYITMEEFYMRESVNKAVAMDTCERGQLISSMVDDV 441

  Fly   454 FFILRKSIRRALTTQSINGTCAVINNVAACLDGDFVNALKAPLKSGYPSGYID-----LAQAYNA 513
            |:|::|.|.|||::.||:..||:||.....|:.||...|...|:.|:|:....     :..|.|.
 Frog   442 FYIVKKCIGRALSSSSIDCLCAMINLSTTMLESDFREVLCNKLRMGFPATTFQDIQRGVTSAVNL 506

  Fly   514 IQTSLQQGKLHS---SDADRGRANFLVQLNNADISTEYIETLCQTMEQEIAGTFPQTTQVE--RQ 573
            :|:||||||..:   ...|..:.:|||.|||.::.:|.|.||.:.:|.:....|.|....|  :.
 Frog   507 MQSSLQQGKFDTKGIESNDEAKMSFLVSLNNVEVCSENIMTLKKNLENDCNKMFSQGLGGEQAKA 571

  Fly   574 MLDSCLTELKAVRDALKATVDFGMQQLRSSVIKPRLNPWINQFLNYSHNLNEEELAAYEAGETFV 638
            .:||||:::.:|.:..|..:..|:.:|.|:.:||::.||||.||:.|||:.|||...|||.:.:|
 Frog   572 KIDSCLSDMASVSNKFKDLLQEGLGELNSTAVKPQVKPWINLFLSVSHNIEEEEFNDYEANDPWV 636

  Fly   639 QFFIVQLDGLLNSFKNSLSPRNYDALVSILATEVTIQLERAIKKISFNRLGGLVLDQEVRALGSY 703
            |.|||.|:.|:..||..||...|:.|.|:|.:.:.::||:.:.|.:|:|||||..|:|:|:|.:|
 Frog   637 QQFIVNLEQLMAEFKAGLSSVIYENLTSLLTSLIAMELEKVVLKSTFSRLGGLQFDKELRSLIAY 701

  Fly   704 LTGATSWSVRDKMTRISQIATLLNLDKITELSEYWNPENNKEMSSWHLTPNEVRTFLTLRNDFRI 768
            ||..|:|::|||..|::|:||:|||:::||:.:||.|  |....:|.|||.|||..|.||.|||.
 Frog   702 LTTVTTWTIRDKFARLTQMATILNLERVTEILDYWGP--NSGPLTWRLTPAEVRQVLALRIDFRS 764

  Fly   769 EDIKRLQL 776
            ||||||:|
 Frog   765 EDIKRLRL 772

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cog4NP_609413.1 Cog4 166..497 CDD:214809 126/333 (38%)
cog4XP_031755720.1 COG4 175..484 CDD:462425 126/332 (38%)

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