DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Grip75 and Grip163

DIOPT Version :9

Sequence 1:NP_609412.1 Gene:Grip75 / 34441 FlyBaseID:FBgn0026431 Length:650 Species:Drosophila melanogaster
Sequence 2:NP_648537.2 Gene:Grip163 / 39365 FlyBaseID:FBgn0026432 Length:1351 Species:Drosophila melanogaster


Alignment Length:662 Identity:128/662 - (19%)
Similarity:232/662 - (35%) Gaps:143/662 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 DQFIHPCEREIFMDIIKIIKVYQEVEQFTHSSGRKSDTHGELPDSLHGYYLLNLAKGIEMALEEY 93
            ||| ..|...:.:         ||.:....::...|..|.|:|..::..  ||.....|:     
  Fly   779 DQF-QQCHATVHL---------QESDLLKTAASTSSGLHAEIPQDINAN--LNCPDTKEL----- 826

  Fly    94 YAEIGRLEKYCLGNERNSLSYVYNALYAKFPLLVFMRNLITEIHVLNLRGCVLLHNLHQQCEHGD 158
             .|:.|..|   .||.:...:.:|:              ..:.|...||..     |:...|.|.
  Fly   827 -TELQRNRK---RNEHHDGFFSFNS--------------TEDEHTHRLRSL-----LNSNTERGR 868

  Fly   159 IQLEKAIKIIMKP-----VKNAFFSSLAHWLLFGVIDDVHSEF-FIKFTPTDAVDGSSFSKSATC 217
            .:|.     :|:.     .||....:.|...|...||.:|.|. ....||........|...   
  Fly   869 NRLR-----VMETEFGLGYKNTDIETKATPCLPLEIDKLHVEIPLAVLTPMSTTSDVDFGDP--- 925

  Fly   218 SLLSAEKNPEDYIWQYEVNMSQLPGFFSIVLAEKVLFVGQ-TVLVFKMGRNVKVKNKTDPLAAKL 281
               |..:.||........|:|......|..|.:.||.:.: |.|:.|:...:|.:.:|       
  Fly   926 ---SPRELPEIADTANNNNVSGSIESLSPELPKPVLAIAKPTSLLPKLDFGMKDERET------- 980

  Fly   282 AELDSDDIYQLWSGRESEFFKMVVDLSNEDTINVFRLEKVIIDIKNYVSARLSEI--AVNEVDLE 344
             |.|.|.:..|.........:..:.||            |:..:..|.....:|:  ...|..:.
  Fly   981 -EQDRDKVSTLPEACNPFMARRCLQLS------------VMAPLNAYYGLLRNEVLRIFQEQRIY 1032

  Fly   345 RQMGLIKDFFLLGRGEFYLEFCSQMVGTM------ETYREERFKNVTRSFELAATVTGITDDLDK 403
            .....::::|.|..|:|.....::::|.:      .:..::...:...:..|||.....|...:.
  Fly  1033 EHFRKLRNYFFLVDGQFGATLTNEILGRIRAGVGPRSLSQKGILDTILTNALAACSADETTVSEN 1097

  Fly   404 FSLICQRSTSEPDDTSDFNFL-----QGLSLKYEYEWPLNLLFSPTTIERYNNIFRFLLIIR--- 460
            .:|.|   |:.||   ..|||     ..|.|..:.:||||::.|..||.:|..||.:||.:|   
  Fly  1098 LTLNC---TTIPD---TLNFLSVEATSMLKLNCKIDWPLNMVISSETISKYGQIFGYLLKLRHVS 1156

  Fly   461 -----TYQYEIQRVWAKQTWRAKSAKDVPPNNKIIT-------LRNYLMFFLNNMQYYIQVDVLE 513
                 ||:| :|::          .|.:.|..:..|       :|:.:..|:.:.|.::....|.
  Fly  1157 FVLDGTYEY-LQQM----------GKLLGPELRTCTHFRHMQMMRHKMSHFMTSFQTHLVAKALL 1210

  Fly   514 SQFGILMNVIKSRSDFEVIQRAHTVFLANVLSHCFLLNESETQLNVTGSQNRNPIYGTLLKLFGI 578
            |.:......:.:....|.:.:.|..:|..| :...|||....:           :..|:..:..|
  Fly  1211 STWKSFKEELCTADSIEALYKQHVAYLKRV-AFLALLNRRSAK-----------VKETIDNILVI 1263

  Fly   579 CEKFAHMTQTKDPSDDLED--------EVDQLNESFGVQIASLIQLLVDVKSASCLGPLSQLLLR 635
            ..:|..:.|::....|.::        .:.|....|...:..||.|.....::.....:..|:..
  Fly  1264 ILRFCKVIQSQSFIVDQDNYFVHPRFKRLQQEEAEFEKFLQYLIYLGNKAAASGYQEEIGDLICI 1328

  Fly   636 LDFNCWFSASHN 647
            ::||.::..|.|
  Fly  1329 INFNHYYKVSGN 1340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Grip75NP_609412.1 Spc97_Spc98 25..548 CDD:282045 110/553 (20%)
Grip163NP_648537.2 Spc97_Spc98 266..>536 CDD:282045
AP1AR 583..>709 CDD:292373
Spc97_Spc98 <949..1245 CDD:282045 67/333 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455390
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19302
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.