DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grip75 and alp6

DIOPT Version :9

Sequence 1:NP_609412.1 Gene:Grip75 / 34441 FlyBaseID:FBgn0026431 Length:650 Species:Drosophila melanogaster
Sequence 2:NP_001342778.1 Gene:alp6 / 2540690 PomBaseID:SPBC428.20c Length:832 Species:Schizosaccharomyces pombe


Alignment Length:691 Identity:128/691 - (18%)
Similarity:249/691 - (36%) Gaps:201/691 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 VYQEVEQFTH-----SSGRKSDTHGELPDSLHGYYLLNLAKGIEMALEEYYAEIGRLEKYCLGNE 108
            :|||::.|::     |.....|...:...:.....|.:|...|...|..:.|.|..|:       
pombe   239 LYQELKVFSNYDPSVSQSIDGDNVSKAFINDQSLALQSLKSVISKELTNFLALIASLD------- 296

  Fly   109 RNSLSYVYNALYAKFPLLVFMRNLI-TEIHVLNLR--GCVLLHNLHQQCE------------HGD 158
                |.:......:.|::...|.:. |::..|.||  ..|:..|::|:.:            |||
pombe   297 ----SQIRADASLEKPMVTIRRCIAWTQVAKLKLRILSSVVNDNMNQENKKRLIQVVSKYNVHGD 357

  Fly   159 IQLEKAIKIIMKPVKNAFFSSLAHWLLFGVIDDVHSEFFIKFTPTDAVDGSSFSKSATCSLLSAE 223
            ..:::....|:..:....:..:.:|:..|.:.|.:.|||:|                       |
pombe   358 PLIQELSDKILTEITGPLYEMIENWIYKGELVDPYQEFFVK-----------------------E 399

  Fly   224 KNPE---------DYIW--QYEVNMSQLPGFFSIVLAEKVLFVGQTVLVFKMGRNVKVKNKTDPL 277
            ||..         |.:|  :|.::...:|.|.|..|.:|:..:|:::...:.|            
pombe   400 KNGSESHDHQGQGDVVWKGKYFLDKELIPSFLSEELVDKIFLIGKSLNFARYG------------ 452

  Fly   278 AAKLAELD-SDDIYQ----LWSGRESEFFKMVVDLSNEDTIN--VFRLEKVIIDIKNYVSARLSE 335
               ..:.| :.:.||    ..|.|:....:.|||.:..::||  |:.:|:|.             
pombe   453 ---CGDFDWAQEHYQKLVKKLSYRDPHSLETVVDKAYTESINHLVYLMEEVF------------- 501

  Fly   336 IAVNEVDLERQMGLIKDFFLLGRGEFYLEFCSQMVGTMETYREERFK-NVTRSFELAATVTGITD 399
                  .|...:..||.:.|||:|:|.......:..:::......|: |:|.|.|.|        
pombe   502 ------HLTDHLKAIKKYLLLGQGDFVDLLMESLGNSLDQPANTLFRHNLTASLESA-------- 552

  Fly   400 DLDKFSLICQRSTSEPD------DTSDFNFLQG------LSLKYEYEWPLNLLFSPTTIERYNNI 452
                  :....::.||:      |........|      .:|:|:.:.|:|::.:|....:|..|
pombe   553 ------IRSSNASYEPEYVLKRLDARLLELSHGETGWDVFTLEYKVDSPINVIITPYCSRQYLKI 611

  Fly   453 FRFLLIIRTYQYEIQRVWAKQTWRAKSAKDVPPNNKIITLRN--YLMF--------------FLN 501
            |.||..::..::.:...|.:.....::           ..||  |..|              |:.
pombe   612 FNFLWRLKRIEFALAHSWRRVNLGERN-----------VFRNLDYTKFEWHFVSCHLAEMIHFVC 665

  Fly   502 NMQYYIQVDVLESQFGIL-MNVIKSRSDFEVIQRAHTVFLANVLSHCFLLNESETQLNVTGSQNR 565
            .:||||..:|:|..:..| :.:.|..:..:....||..::.:: :|..||.         |.::|
pombe   666 QLQYYILFEVIEISWQELQLAMEKPNATLDTYIEAHEKYVTSI-THKGLLG---------GGKSR 720

  Fly   566 NP----------------IYGTLLKLFGICEKFAHMTQTKDP-SDD--------LEDEVDQLNES 605
            |.                .:..:..|:......::..:...| |.|        :::|:....|.
pombe   721 NEDSFLHQLHDILKVILNFHDAIELLYNFSCSLSNRIRINVPISTDALAAQYTPIKNELSNFTEE 785

  Fly   606 FGVQIASLIQLLVDVKSASCLGPLSQLLLRLDFNCWFSASH 646
            |.|::..|:..|...|...    :..|.:||::| .|..||
pombe   786 FQVRLQKLLHGLASHKDPE----MRFLSVRLNYN-EFYVSH 821

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Grip75NP_609412.1 Spc97_Spc98 25..548 CDD:282045 105/566 (19%)
alp6NP_001342778.1 Spc97_Spc98 196..713 CDD:309310 105/567 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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