DRSC/TRiP Functional Genomics Resources

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Protein Alignment RluA-2 and rluD

DIOPT Version :10

Sequence 1:NP_609411.1 Gene:RluA-2 / 34440 FlyBaseID:FBgn0032256 Length:547 Species:Drosophila melanogaster
Sequence 2:NP_417085.1 Gene:rluD / 947087 ECOCYCID:EG12098 Length:326 Species:Escherichia coli


Alignment Length:273 Identity:72/273 - (26%)
Similarity:121/273 - (44%) Gaps:35/273 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 FTTFAKGRWVDEKILD--VFVREFRAAPPEEYERSLEAGKLTVNSEKVPKDYKIKHNDLLANVVH 205
            |..:::.| :.|.|||  |.|.......|:  |:.|...::.:|:| :.::.:.:..|:      
E. coli    28 FPDYSRSR-IKEWILDQRVLVNGKVCDKPK--EKVLGGEQVAINAE-IEEEARFEPQDI------ 82

  Fly   206 RHEVPVTSQPIKIVYMDKDIVVVNKPASIPVHPCGRYRHNTVVFILAKEH----NLKNLRTIHRL 266
                     |:.|||.|:||:::|||..:.|||.......||:..|...:    ::.....:|||
E. coli    83 ---------PLDIVYEDEDIIIINKPRDLVVHPGAGNPDGTVLNALLHYYPPIADVPRAGIVHRL 138

  Fly   267 DRLTSGLLLFGRTAEKARELELQIRTRQVQKEYVCRVEGRFPDGIVECNEKIDVVSYKIGVCKVS 331
            |:.|:||::..:|......|...::.|::.:||.....|....| ...:|.|.....|.....|.
E. coli   139 DKDTTGLMVVAKTVPAQTRLVESLQRREITREYEAVAIGHMTAG-GTVDEPISRHPTKRTHMAVH 202

  Fly   332 PKGKDCKTTFKRIGEVGSDSIVLCKPLTGRMHQIRVHLQFLGYPISNDPLYNHEVFGPLKGRGGD 396
            |.||...|.::.:......:.:..:..|||.||||||:..:.:|:..||:|.... .|.||    
E. coli   203 PMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHMAHITHPLVGDPVYGGRP-RPPKG---- 262

  Fly   397 IGGITEEQLISNL 409
                ..|..||.|
E. coli   263 ----ASEAFISTL 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RluA-2NP_609411.1 PseudoU_synth_ScRIB2 202..386 CDD:211331 51/187 (27%)
rluDNP_417085.1 rluD 1..325 CDD:183020 72/273 (26%)

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