DRSC/TRiP Functional Genomics Resources

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Protein Alignment RluA-2 and AT1G78910

DIOPT Version :10

Sequence 1:NP_609411.1 Gene:RluA-2 / 34440 FlyBaseID:FBgn0032256 Length:547 Species:Drosophila melanogaster
Sequence 2:NP_178012.2 Gene:AT1G78910 / 844229 AraportID:AT1G78910 Length:478 Species:Arabidopsis thaliana


Alignment Length:353 Identity:86/353 - (24%)
Similarity:130/353 - (36%) Gaps:121/353 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 DDEGHVKKVKLEANSLKTKRPGFSDERYDETSYYFENGLRKVYPYFFTFTTFAKGRWVDEKILDV 159
            |..|||..:..                   ..||||....|...     |.|.||         :
plant    76 DSGGHVTAISW-------------------VKYYFEEIYDKAIQ-----THFTKG---------L 107

  Fly   160 FVREFRAAPPEEYERSLEAGKLTVNSEKVPKDYKIKHNDLLANVVHRHEVPVTSQPIKIV----- 219
            ...|||..  .:..|..|.|.:.:.        |||||::: .:..:..:||:...::|.     
plant   108 VQMEFRGR--RDASREKEDGAIPMR--------KIKHNEVM-QIGDKIWLPVSIAEMRISKRYDT 161

  Fly   220 ---------------------YMDKDIVVVNKPASIPVH---PCGRYRHNTVVFILAKEHNLKN- 259
                                 :.|..|:|:|||..:||.   |.    ||::..:.|...:..| 
plant   162 IPSGTLYPNADEIAYLQRLVRFKDSAIIVLNKPPKLPVKGNVPI----HNSMDALAAAALSFGND 222

  Fly   260 --LRTIHRLDRLTSGLLLFGRTAE------------KARELELQIRTRQVQ---KEYVCRVEG-- 305
              .|.:|||||.|||||:.|||.|            |.|....:...:..:   ::|...|.|  
plant   223 EGPRLVHRLDRETSGLLVMGRTKESIDYLHSVFSDYKGRNSSCKAWNKACEAMYQQYWALVIGSP 287

  Fly   306 RFPDGIVEC--------NEKIDVVSYKIGVCKVSPKG------KDCKTTFKRIG-EVGSDSIVLC 355
            :..:|::..        :.|.|.|        |..:|      :|..|.:|.:| ::...|.|..
plant   288 KEKEGLISAPLSKVLLDDGKTDRV--------VLAQGSGFEASQDAITEYKVLGPKINGCSWVEL 344

  Fly   356 KPLTGRMHQIRVH-LQFLGYPISNDPLY 382
            :|:|.|.||:||| .:.||.||..|..|
plant   345 RPITSRKHQLRVHCAEALGTPIVGDYKY 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RluA-2NP_609411.1 PseudoU_synth_ScRIB2 202..386 CDD:211331 62/246 (25%)
AT1G78910NP_178012.2 PseudoU_synth_RluA_like 188..385 CDD:211346 58/197 (29%)

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