DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RluA-2 and AT1G56345

DIOPT Version :10

Sequence 1:NP_609411.1 Gene:RluA-2 / 34440 FlyBaseID:FBgn0032256 Length:547 Species:Drosophila melanogaster
Sequence 2:NP_176031.2 Gene:AT1G56345 / 842088 AraportID:AT1G56345 Length:322 Species:Arabidopsis thaliana


Alignment Length:353 Identity:82/353 - (23%)
Similarity:136/353 - (38%) Gaps:114/353 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 FFTFTTFAKGRWVDEKILDVFVREFRAAPPEEYERSLEAGKLTVNSEK--------VPKDYKIKH 196
            ||:||..|.         .:..:.:.|.|.:..|.:.|   |.:|..|        :.||.:::.
plant     7 FFSFTFSAN---------SIITKPYFAIPIKAMEATSE---LNLNYPKPISAPPPPISKDIELRR 59

  Fly   197 ------NDLLANVVHRHEVPVTSQPIKIVYMDKDIVVVNKPASIPVHPCGRYRHNTVVFIL--AK 253
                  ...|.|:...          .|:|.|:.::.||||..:   .|.....:....:|  :.
plant    60 AMEASSKSSLFNLTRD----------DILYEDEYLMAVNKPKGV---YCEAVLRSAPQIVLDSSS 111

  Fly   254 EHNLKNLRTIHRLDRLTSGLLLFGRTAEKARELELQIRTRQVQKEYVCRVEGRFPDGIVECNEKI 318
            |::|.|     ||||.|||:::..::.:.|.:|.......:::|.|:....|..|:.     .::
plant   112 EYHLAN-----RLDRDTSGVMIITKSHKVAAKLVKAFTEHKIRKSYIALCIGSSPNW-----RRV 166

  Fly   319 DV-------------VSYKIGVCKVSPKG---KDCKTTFKRI----------------------G 345
            .|             |...:.|.:|.|.|   :|.:|||:.:                      |
plant   167 TVSSGHGRSKHGAWRVYAALDVGRVLPGGSFVRDMETTFEVVSVNSVKNESCELEDVNHVIVAEG 231

  Fly   346 E----VGSDS-----IVLCKPLTGRMHQIRVHLQFLGYPISNDPLYNHEVFGPLKGRGGDIGGIT 401
            |    .|.|.     :|...|.:||.||||:|.|:||.||..|..| |.|:        :..|.|
plant   232 ERELSCGGDDDDVVVVVRAFPRSGRTHQIRLHCQYLGIPIRGDVKY-HGVY--------EWNGRT 287

  Fly   402 EE--QLISNLISIHNAENWLGLEGDQIV 427
            .|  :|.:..:|:.:.     :.||.||
plant   288 FEGHELHAECLSLDHP-----VTGDSIV 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RluA-2NP_609411.1 PseudoU_synth_ScRIB2 202..386 CDD:211331 57/232 (25%)
AT1G56345NP_176031.2 RluA 77..316 CDD:440330 66/261 (25%)

Return to query results.
Submit another query.