DRSC/TRiP Functional Genomics Resources

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Protein Alignment RluA-2 and AT3G52260

DIOPT Version :10

Sequence 1:NP_609411.1 Gene:RluA-2 / 34440 FlyBaseID:FBgn0032256 Length:547 Species:Drosophila melanogaster
Sequence 2:NP_001190071.1 Gene:AT3G52260 / 824391 AraportID:AT3G52260 Length:416 Species:Arabidopsis thaliana


Alignment Length:236 Identity:65/236 - (27%)
Similarity:105/236 - (44%) Gaps:77/236 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 PVTSQPIKIVYMDKDIVVVNKPASIPVHPCGRYRHNTVV------------FILAKE--HNLKNL 260
            |.|...::::|.|.|::.:|||:.:.|.|.|.::..||:            :|.::|  |.:   
plant   121 PDTPYSLEVLYEDDDLIALNKPSGLQVLPGGLFQQRTVLTQLQWCFGKNDSYIGSRESPHPV--- 182

  Fly   261 RTIHRLDRLTSGLLLFGRT-----------AE-----KARELELQIRT-RQVQKEYVCRVEGRFP 308
             .:|||.|.|||:||..:|           ||     .:..|:.:..| |::.|.|     ....
plant   183 -PVHRLGRGTSGILLCAKTKLAKTKLAAYFAEGTSLVGSGNLDQECGTGRKLSKIY-----RALA 241

  Fly   309 DGIVECNEKIDVVSYKIGVCK----------VSPKGKDCKTTFKRIGEVGSD-----SIVLCKPL 358
            |||||.:|.  |:...|||.:          .||:|   |..|.::..:..|     |:|..:..
plant   242 DGIVEEDEV--VIKQPIGVVRYPGVAQGLYVASPEG---KPAFSKVFVLERDREKNCSLVKVEIQ 301

  Fly   359 TGRMHQIRVHLQFLGYPI-----------------SNDPLY 382
            :||.||||:||.::|:|:                 :.||||
plant   302 SGRPHQIRIHLAYMGHPLVEMTMFTGSECLRADQSAGDPLY 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RluA-2NP_609411.1 PseudoU_synth_ScRIB2 202..386 CDD:211331 65/236 (28%)
AT3G52260NP_001190071.1 RluA 129..411 CDD:440330 63/228 (28%)

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