DRSC/TRiP Functional Genomics Resources

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Protein Alignment RluA-2 and AT3G19440

DIOPT Version :10

Sequence 1:NP_609411.1 Gene:RluA-2 / 34440 FlyBaseID:FBgn0032256 Length:547 Species:Drosophila melanogaster
Sequence 2:NP_188575.1 Gene:AT3G19440 / 821478 AraportID:AT3G19440 Length:477 Species:Arabidopsis thaliana


Alignment Length:302 Identity:82/302 - (27%)
Similarity:117/302 - (38%) Gaps:88/302 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 IVYMDKDIVVVNKPASIPVHPCGRYRHNTVVFILA----KEHNLKNLRTIHRLDRLTSGLLLFGR 278
            ::|.|..|:|:|||..:.|.  |.....|.:..||    |....::.|.:|||||..||||:..|
plant   185 VLYKDPAIIVLNKPHGLAVQ--GGSGIKTSIDELAASCLKFDKSESPRLVHRLDRDCSGLLVLAR 247

  Fly   279 TAEKARELELQIR--------------TRQVQKEYVCRVEGRFP----------------DGIVE 313
            |...|..|....|              .:.::::|:..|.|..|                ||..|
plant   248 TQTAATVLHSIFREKTTGASAYGVKKNVKSLKRKYMALVIGCPPRQRGQISAPLRKVVVDDGKSE 312

  Fly   314 ---CNEKIDVVS-------YKIGVCKVSPKGKDCKTTFKRIGEVGSDSIVLCKPLTGRMHQIRVH 368
               .|:..::||       |:  |.:.||.|    .|:..:           :|||||.||:|||
plant   313 RITVNDNGELVSTQHAITEYR--VIESSPHG----YTWLEL-----------RPLTGRKHQLRVH 360

  Fly   369 -LQFLGYPISNDPLYN------HEVF-----GPLK------GRGGDIGGITEEQ----LISNLIS 411
             .:.||.||..|..|.      .|.|     .|.|      |...|.|.::.:|    |.|..|.
plant   361 CAEVLGTPIVGDYKYGWQAHKAREPFVSSENNPTKQSSSPFGLDLDGGDVSSKQPHLHLHSKQID 425

  Fly   412 IHNAENWLGLEGDQIVS-GEIKDVAASTSVVEAPSVVQAPIN 452
            :.|....  ||..|:.| .:|.|:.:.......||.:|...|
plant   426 LPNISQL--LEKMQVSSDSDISDLDSLKFDAPLPSHMQLSFN 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RluA-2NP_609411.1 PseudoU_synth_ScRIB2 202..386 CDD:211331 60/218 (28%)
AT3G19440NP_188575.1 RluA 185..461 CDD:440330 80/296 (27%)

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