DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RluA-1 and truC

DIOPT Version :10

Sequence 1:NP_723592.1 Gene:RluA-1 / 34438 FlyBaseID:FBgn0051719 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_417271.1 Gene:truC / 947242 ECOCYCID:G7449 Length:260 Species:Escherichia coli


Alignment Length:203 Identity:64/203 - (31%)
Similarity:94/203 - (46%) Gaps:37/203 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   377 IKIVHMDEDIVVVNKPASIPVHPCGRYRHNTVVFILAKEFNL-KNLRTIHRLDRLTSGLLLFGRS 440
            ::|::.||.:|.||||:...||.....|...||.:......: :::.|.|||||.|||:||.|.|
E. coli     2 LEILYQDEWLVAVNKPSGWLVHRSWLDRDEKVVVMQTVRDQIGQHVFTAHRLDRPTSGVLLMGLS 66

  Fly   441 PKKARQMEQQIRNRQVEKEYICRVEGVFPDGIV------------------ECKEPIEVVSYKIG 487
            .:..|.:.||....|::|.|...|.|...:..|                  |.|.|...|::..|
E. coli    67 SEAGRLLAQQFEQHQIQKRYHAIVRGWLMEEAVLDYPLVEELDKIADKFAREDKGPQPAVTHYRG 131

  Fly   488 VCKVS---AKGKDCTTTFQKLSQNGTTSVVLCKPLTGRMHQIRVHLQYLGYPILNDPLYNHEVFG 549
            :..|.   |.|:..||.:         .:|..:|.|||.||:|.||.:|.:||:.|..:     |
E. coli   132 LATVEMPVATGRYPTTRY---------GLVELEPKTGRKHQLRRHLAHLRHPIIGDSKH-----G 182

  Fly   550 PLK-GRSG 556
            .|: .|||
E. coli   183 DLRQNRSG 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RluA-1NP_723592.1 PseudoU_synth_ScRIB2 363..547 CDD:211331 59/191 (31%)
truCNP_417271.1 PRK11112 1..255 CDD:182971 64/203 (32%)

Return to query results.
Submit another query.