DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RluA-1 and RPUSD4

DIOPT Version :9

Sequence 1:NP_723592.1 Gene:RluA-1 / 34438 FlyBaseID:FBgn0051719 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_116184.2 Gene:RPUSD4 / 84881 HGNCID:25898 Length:377 Species:Homo sapiens


Alignment Length:218 Identity:66/218 - (30%)
Similarity:105/218 - (48%) Gaps:44/218 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   357 HNDLLANIVHRHEVPVTCQPIKIVHMDEDIVVVNKPASIPVH--PCGRYRHNTVVFILAKEFN-- 417
            |.::||..:.|          .|:|.|:::||:|||..:|||  |..:.....|:.||||..:  
Human    87 HPNVLAKALTR----------GILHQDKNLVVINKPYGLPVHGGPGVQLCITDVLPILAKMLHGH 141

  Fly   418 -LKNLRTIHRLDRLTSGLLLFGRSPKKARQMEQQIRNRQVEKEY-ICRVEGVFPD-GIVECKEPI 479
             .:.|...||||:.|:|:::.......|.|:::..|.|||.|:| ...|....|. |:|:    |
Human   142 KAEPLHLCHRLDKETTGVMVLAWDKDMAHQVQELFRTRQVVKKYWAITVHVPMPSAGVVD----I 202

  Fly   480 EVV-----------------SYKIGVCKV-----SAKGKDCTTTFQKLSQNGTTSVVLCKPLTGR 522
            .:|                 ||::...|:     |...:...|.:|.||...::::|..:|:||.
Human   203 PIVEKEAQGQQQHHKMTLSPSYRMDDGKMVKVRRSRNAQVAVTQYQVLSSTLSSALVELQPITGI 267

  Fly   523 MHQIRVHLQY-LGYPILNDPLYN 544
            .||:||||.: |..|||.|..|:
Human   268 KHQLRVHLSFGLDCPILGDHKYS 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RluA-1NP_723592.1 Auts2 21..>162 CDD:291981
PseudoU_synth_ScRIB2 363..547 CDD:211331 63/212 (30%)
RPUSD4NP_116184.2 PseudoU_synth_RluCD_like 106..329 CDD:211346 59/189 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0564
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.