DRSC/TRiP Functional Genomics Resources

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Protein Alignment RluA-1 and AT1G78910

DIOPT Version :10

Sequence 1:NP_723592.1 Gene:RluA-1 / 34438 FlyBaseID:FBgn0051719 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_178012.2 Gene:AT1G78910 / 844229 AraportID:AT1G78910 Length:478 Species:Arabidopsis thaliana


Alignment Length:538 Identity:119/538 - (22%)
Similarity:186/538 - (34%) Gaps:181/538 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 QVPVQVPVQMAQRTAPAACSMVQPLNCLPHQELNHLSSINLNLLRSPAP-PLP--AIQVLPSAEV 227
            |:.:.|.::...|.||...|:::..|.:.|             |..|.. |||  .|.:.|....
plant    10 QIYLTVLIRRYSRVAPPPSSVIRVTNNVAH-------------LGPPKQGPLPRQLISLPPFPGH 61

  Fly   228 PINKKTTSPRDSENLKIKVPEKRKTDDNDQIKELKKAKLETKALKAKRPGFTDERYQETSYYMEN 292
            |:..|.......:.           |....:..:...|                      ||.|.
plant    62 PLPGKNAGADGDDG-----------DSGGHVTAISWVK----------------------YYFEE 93

  Fly   293 GLRKVYPYYFTFTTFTKGRWVGEKILDIFSREFRAHPAEEYERCIQTGTLTVNFEKVPIDYRLKH 357
            ...|...     |.||||         :...|||.......|:  :.|.:.:.        ::||
plant    94 IYDKAIQ-----THFTKG---------LVQMEFRGRRDASREK--EDGAIPMR--------KIKH 134

  Fly   358 NDLLANIVHRHEVPVTCQPIKIV--------------------------HMDEDIVVVNKPASIP 396
            |::: .|..:..:||:...::|.                          ..|..|:|:|||..:|
plant   135 NEVM-QIGDKIWLPVSIAEMRISKRYDTIPSGTLYPNADEIAYLQRLVRFKDSAIIVLNKPPKLP 198

  Fly   397 VH---PCGRYRHNTVVFILAKEFNLKN---LRTIHRLDRLTSGLLLFGR------------SPKK 443
            |.   |.    ||::..:.|...:..|   .|.:|||||.|||||:.||            |..|
plant   199 VKGNVPI----HNSMDALAAAALSFGNDEGPRLVHRLDRETSGLLVMGRTKESIDYLHSVFSDYK 259

  Fly   444 ARQMEQQIRNRQVE---KEYICRVEGVFP---DGIVECKEPIEVVSYKIGVCK--VSAKG----- 495
            .|....:..|:..|   ::|...|.| .|   :|::..  |:..|....|...  |.|:|     
plant   260 GRNSSCKAWNKACEAMYQQYWALVIG-SPKEKEGLISA--PLSKVLLDDGKTDRVVLAQGSGFEA 321

  Fly   496 -KDCTTTFQKLSQ--NGTTSVVLCKPLTGRMHQIRVH-LQYLGYPILNDPLYNHEV--------- 547
             :|..|.::.|..  ||.:.|.| :|:|.|.||:||| .:.||.||:.|..|...|         
plant   322 SQDAITEYKVLGPKINGCSWVEL-RPITSRKHQLRVHCAEALGTPIVGDYKYGWFVHKRWKQMPQ 385

  Fly   548 --FGPLKGR-------------SGDIGGKSDEELIRDLINIHNAENWLGIDCDSDISMFKSTKDE 597
              ..|..|:             .|.:..|.      .|:::|..|..|     .:|:.|....::
plant   386 VDIEPTTGKPYKLRRPEGLDVQKGSVLSKV------PLLHLHCREMVL-----PNIAKFLHVMNQ 439

  Fly   598 ADRESLSSEHTSVVHHSD 615
            .:.|.|   ||.::...|
plant   440 QETEPL---HTGIIDKPD 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RluA-1NP_723592.1 PseudoU_synth_ScRIB2 363..547 CDD:211331 67/244 (27%)
AT1G78910NP_178012.2 PseudoU_synth_RluA_like 188..385 CDD:211346 63/204 (31%)

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