DRSC/TRiP Functional Genomics Resources

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Protein Alignment RluA-1 and AT1G56345

DIOPT Version :10

Sequence 1:NP_723592.1 Gene:RluA-1 / 34438 FlyBaseID:FBgn0051719 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_176031.2 Gene:AT1G56345 / 842088 AraportID:AT1G56345 Length:322 Species:Arabidopsis thaliana


Alignment Length:307 Identity:77/307 - (25%)
Similarity:117/307 - (38%) Gaps:91/307 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   301 YFTFTTFTKGRWVGEKILDIFSREFRAHPAEEYERCIQTGTLTVNFEKVPI---------DYRLK 356
            :|:| ||:..        .|.::.:.|.|.:..|   .|..|.:|:.| ||         |..|:
plant     7 FFSF-TFSAN--------SIITKPYFAIPIKAME---ATSELNLNYPK-PISAPPPPISKDIELR 58

  Fly   357 H------NDLLANIVHRHEVPVTCQPIKIVHMDEDIVVVNKPASIPVHPCGRYRHNTVVFIL--A 413
            .      ...|.|:...          .|::.||.::.||||..:   .|.....:....:|  :
plant    59 RAMEASSKSSLFNLTRD----------DILYEDEYLMAVNKPKGV---YCEAVLRSAPQIVLDSS 110

  Fly   414 KEFNLKNLRTIHRLDRLTSGLLLFGRSPKKARQMEQQIRNRQVEKEYICRVEGVFPD-------- 470
            .|::|.|     ||||.|||:::..:|.|.|.::.:.....::.|.||....|..|:        
plant   111 SEYHLAN-----RLDRDTSGVMIITKSHKVAAKLVKAFTEHKIRKSYIALCIGSSPNWRRVTVSS 170

  Fly   471 GIVECKEPIEVVSYKIGVCKVSAKG---KDCTTTFQKLSQNGTTS-------------------- 512
            |....|.....|...:.|.:|...|   :|..|||:.:|.|...:                    
plant   171 GHGRSKHGAWRVYAALDVGRVLPGGSFVRDMETTFEVVSVNSVKNESCELEDVNHVIVAEGEREL 235

  Fly   513 -----------VVLCKPLTGRMHQIRVHLQYLGYPILNDPLYNHEVF 548
                       ||...|.:||.||||:|.||||.||..|..| |.|:
plant   236 SCGGDDDDVVVVVRAFPRSGRTHQIRLHCQYLGIPIRGDVKY-HGVY 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RluA-1NP_723592.1 PseudoU_synth_ScRIB2 363..547 CDD:211331 59/227 (26%)
AT1G56345NP_176031.2 RluA 77..316 CDD:440330 59/214 (28%)

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