DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RluA-1 and AT3G19440

DIOPT Version :10

Sequence 1:NP_723592.1 Gene:RluA-1 / 34438 FlyBaseID:FBgn0051719 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_188575.1 Gene:AT3G19440 / 821478 AraportID:AT3G19440 Length:477 Species:Arabidopsis thaliana


Alignment Length:273 Identity:75/273 - (27%)
Similarity:112/273 - (41%) Gaps:56/273 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   379 IVHMDEDIVVVNKPASIPVHPCGRYRHNTVVFILA----KEFNLKNLRTIHRLDRLTSGLLLFGR 439
            :::.|..|:|:|||..:.|.  |.....|.:..||    |....::.|.:|||||..||||:..|
plant   185 VLYKDPAIIVLNKPHGLAVQ--GGSGIKTSIDELAASCLKFDKSESPRLVHRLDRDCSGLLVLAR 247

  Fly   440 SPKKARQMEQQIRN--------------RQVEKEYICRVEGVFPDGIVECKEPIEVVSYKIGVCK 490
            :...|..:....|.              :.::::|:..|.|..|....:...|:..|....|..:
plant   248 TQTAATVLHSIFREKTTGASAYGVKKNVKSLKRKYMALVIGCPPRQRGQISAPLRKVVVDDGKSE 312

  Fly   491 ---VSAKGKDCTTTFQ-------KLSQNGTTSVVLCKPLTGRMHQIRVH-LQYLGYPILNDPLYN 544
               |:..|:..:|...       :.|.:|.|.:.| :|||||.||:||| .:.||.||:.|..|.
plant   313 RITVNDNGELVSTQHAITEYRVIESSPHGYTWLEL-RPLTGRKHQLRVHCAEVLGTPIVGDYKYG 376

  Fly   545 ------HEVF-----GPLKGRS---------GDIGGKSDEELIR----DLINIHNAENWLGIDCD 585
                  .|.|     .|.|..|         ||:..|.....:.    ||.||......:.:..|
plant   377 WQAHKAREPFVSSENNPTKQSSSPFGLDLDGGDVSSKQPHLHLHSKQIDLPNISQLLEKMQVSSD 441

  Fly   586 SDISMFKSTKDEA 598
            ||||...|.|.:|
plant   442 SDISDLDSLKFDA 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RluA-1NP_723592.1 PseudoU_synth_ScRIB2 363..547 CDD:211331 55/202 (27%)
AT3G19440NP_188575.1 RluA 185..461 CDD:440330 75/273 (27%)

Return to query results.
Submit another query.