DRSC/TRiP Functional Genomics Resources

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Protein Alignment RluA-1 and Rpusd4

DIOPT Version :10

Sequence 1:NP_723592.1 Gene:RluA-1 / 34438 FlyBaseID:FBgn0051719 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_082316.1 Gene:Rpusd4 / 71989 MGIID:1919239 Length:377 Species:Mus musculus


Alignment Length:280 Identity:85/280 - (30%)
Similarity:133/280 - (47%) Gaps:55/280 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   307 FTKGRW------VGEKILDI--FSREFRAHPAEEYERCIQTGTLTVN---FEKVPIDYRLK--HN 358
            ||.|.|      ...:.|:.  .:.:.||...|:..:.::..|..|.   .|.|....:|:  |.
Mouse    24 FTPGSWSFCSSATSSRPLNAQRLAEKLRAQKQEQKAKEVRVPTNPVQRRVQELVRFTQQLQRVHP 88

  Fly   359 DLLANIVHRHEVPVTCQPIKIVHMDEDIVVVNKPASIPVH--PCGRYRHNTVVFILAKEFN---L 418
            ::||..:.|          :|:|.|.|:||:|||..:|||  |..:...:.|:.||||..:   .
Mouse    89 NVLAKELSR----------RILHQDNDLVVINKPYGLPVHGGPGVQLCISDVLPILAKMLHGHKA 143

  Fly   419 KNLRTIHRLDRLTSGLLLFGRSPKKARQMEQQIRNRQVEKEY-ICRVEGVFPD-GIVECKEPI-- 479
            :.|...||||:.|:|:::.......|.|:::..|.|||||:| ...|....|. |:|:.  ||  
Mouse   144 EPLHLCHRLDKETTGVMVLAWEKDMAHQVQELFRTRQVEKKYWAITVRVPLPSAGVVDI--PIKE 206

  Fly   480 -EV------------VSYKIG---VCKVSAKGKD---CTTTFQKLSQNGTTSVVLCKPLTGRMHQ 525
             ||            .||::.   :.||.| .:|   ..|.:|.||...::::|..:|:||..||
Mouse   207 KEVQGPQQHHKMTLSPSYRLDNGKMVKVRA-SRDAHVAVTQYQVLSSASSSALVELQPVTGIKHQ 270

  Fly   526 IRVHLQY-LGYPILNDPLYN 544
            :||||.: |..|||.|..|:
Mouse   271 LRVHLSFGLDCPILGDHKYS 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RluA-1NP_723592.1 PseudoU_synth_ScRIB2 363..547 CDD:211331 69/211 (33%)
Rpusd4NP_082316.1 PseudoU_synth_RluA_like 106..329 CDD:211346 64/188 (34%)

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