DRSC/TRiP Functional Genomics Resources

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Protein Alignment RluA-1 and rpusd2

DIOPT Version :9

Sequence 1:NP_723592.1 Gene:RluA-1 / 34438 FlyBaseID:FBgn0051719 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_001314846.1 Gene:rpusd2 / 565088 ZFINID:ZDB-GENE-120411-43 Length:579 Species:Danio rerio


Alignment Length:507 Identity:223/507 - (43%)
Similarity:308/507 - (60%) Gaps:46/507 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 KRKTDDNDQIK-ELKKAKLETKALKAKRPG---------------FTDERYQETSYYMENGLRKV 297
            |||.::.|:.. :....|.:....|..|||               |..|.:.|||||.|.|||||
Zfish    94 KRKNEETDEAAGQCSGRKRKRGGGKQLRPGERYVPPPQKRNTGVSFNQEHFAETSYYFEGGLRKV 158

  Fly   298 YPYYFTFTTFTKGRWVGEKILDIFSREFRAHPAEEYERCIQTGTLTVNFEKVPID---YRLKHND 359
            :||||.|.::.||||:|:.:||:|.:||||...:.|...::.|.:.:|  :.|:|   ..||:||
Zfish   159 HPYYFDFKSYCKGRWIGKTLLDVFKKEFRAESLDYYNAAVKEGRIKLN--ETPVDDLNVVLKNND 221

  Fly   360 LLANIVHRHEVPVTCQPIKIVHMDEDIVVVNKPASIPVHPCGRYRHNTVVFILAKEFNLKNLRTI 424
            ||.|.|||||.||..||:|::..|.::|||:||:|:|||||||||||||:|||.||..|..|.|:
Zfish   222 LLRNTVHRHEPPVCGQPLKLLVDDGEVVVVDKPSSLPVHPCGRYRHNTVIFILGKEKGLVGLHTV 286

  Fly   425 HRLDRLTSGLLLFGRSPKKARQMEQQIRNRQVEKEYICRVEGVFPDGIVECKEPIEVVSYKIGVC 489
            |||||||||:|||.|:.:.:::::..:|.||:||||:|||||.||:..|.|:|||.|||:::|:|
Zfish   287 HRLDRLTSGVLLFARTLEVSKKLDVMVRERQLEKEYVCRVEGEFPEAEVVCEEPILVVSFRVGLC 351

  Fly   490 KVSAKGKDCTTTFQKLSQNGTTSVVLCKPLTGRMHQIRVHLQYLGYPILNDPLYNHEVFGPLKGR 554
            :|..|||:..|.||:||.||.:|||.|:|||||.||||||||:||:||||||:|....:||.:.:
Zfish   352 RVDPKGKESRTIFQRLSFNGRSSVVRCRPLTGRTHQIRVHLQFLGFPILNDPIYGSSAWGPNRAK 416

  Fly   555 SGDIGGKSDEELIRDLINIHNAENWLG-IDC-DSDISMFKSTKDEADRESLSSEHTSVVHHSDDD 617
            .| :.|.|||||:..||..|.::..|. :|. |.::|.....||.|...   :|..:.:..|...
Zfish   417 GG-LVGMSDEELLEALIEEHRSKESLHLLDLPDEEVSGKTKCKDGAQGR---NEQITAIESSSGS 477

  Fly   618 GCVNSRETTPPCNEPQQPENSVKLLETTNAVKEYQVAAQKSSSEICPAPLDAVESPLNGGGCNVG 682
            ..|:..|......:..|...|..:.|...|.|:..:|:..:|.                  ....
Zfish   478 SEVSLDEVKAESRQVVQQSTSESVGEINGARKDKDLASDDASR------------------TGRS 524

  Fly   683 KVTVDEH-CYECKVHYRDPKSKDLIMYLHAWKYKGPGWEYETELPNWARNDW 733
            |..|.:| |.|||:...||..|:|||||||.:||||.:||.|:||:||:.||
Zfish   525 KDFVRDHLCGECKIVRPDPTEKELIMYLHALRYKGPDFEYSTQLPDWAKEDW 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RluA-1NP_723592.1 Auts2 21..>162 CDD:291981
PseudoU_synth_ScRIB2 363..547 CDD:211331 113/183 (62%)
rpusd2NP_001314846.1 PseudoU_synth_ScRIB2 224..408 CDD:211331 113/183 (62%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592192
Domainoid 1 1.000 202 1.000 Domainoid score I2945
eggNOG 1 0.900 - - E1_COG0564
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 411 1.000 Inparanoid score I1832
OMA 1 1.010 - - QHG51879
OrthoDB 1 1.010 - - D504187at33208
OrthoFinder 1 1.000 - - FOG0002443
OrthoInspector 1 1.000 - - otm26429
orthoMCL 1 0.900 - - OOG6_100211
Panther 1 1.100 - - LDO PTHR21600
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1681
SonicParanoid 1 1.000 - - X1265
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.800

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