DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment RluA-1 and Rpusd4

DIOPT Version :9

Sequence 1:	NP_723592.1	Gene:	RluA-1 / 34438	FlyBaseID:	FBgn0051719	Length:	739	Species:	Drosophila melanogaster
Sequence 2:	NP_001020455.1	Gene:	Rpusd4 / 315550	RGDID:	1311268	Length:	377	Species:	Rattus norvegicus

Alignment Length:	254	Identity:	80/254 - (31%)
Similarity:	125/254 - (49%)	Gaps:	53/254 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly   322 SREFRAHPAEEYERCIQTGTLTVNFEKVPIDYRLK--HNDLLANIVHRHEVPVTCQPIKIVHMDE 384
            ::|.|. |....:|.:|        |.|....:|:  |.::||..:.|          :|:|.|:
  Rat    59 TKEMRV-PTNPVQRRVQ--------ELVRFTQQLQRVHPNVLAKELSR----------RILHQDK 104

  Fly   385 DIVVVNKPASIPVH--PCGRYRHNTVVFILAKEFN---LKNLRTIHRLDRLTSGLLLFGRSPKKA 444
            |:||:|||..:|||  |..:...:.|:.||||..:   .:.|...||||:.|:|:::.......|
  Rat   105 DLVVINKPYGLPVHGGPGVQLCISDVLPILAKMLHGHKAEPLHLCHRLDKETTGVMVLAWEKDMA 169

  Fly   445 RQMEQQIRNRQVEKEY-ICRVEGVFPD-GIVECKEPI---EVV------------SYKIG---VC 489
            .|:::..|.|||||:| ...|....|. |:|:.  ||   ||.            ||::.   :.
  Rat   170 HQVQELFRTRQVEKKYWAITVRVPLPSAGVVDI--PIMEKEVAGQQQHHKMTLRPSYRMDNGKMV 232

  Fly   490 KVSAKGKD---CTTTFQKLSQNGTTSVVLCKPLTGRMHQIRVHLQY-LGYPILNDPLYN 544
            ||.| .:|   ..|.:|.||...::::|..:|:||..||:||||.: |..|||.|..|:
  Rat   233 KVRA-SRDAHVAVTQYQVLSSTPSSALVELQPVTGIKHQLRVHLAFGLDCPILGDHKYS 290

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
RluA-1	NP_723592.1	Auts2	21..>162	CDD:291981
RluA-1	NP_723592.1	PseudoU_synth_ScRIB2	363..547	CDD:211331	69/211 (33%)
Rpusd4	NP_001020455.1	PseudoU_synth_RluA_like	106..329	CDD:211346	64/188 (34%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0564
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810