DRSC/TRiP Functional Genomics Resources

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Protein Alignment RluA-1 and SPAC18B11.02c

DIOPT Version :9

Sequence 1:NP_723592.1 Gene:RluA-1 / 34438 FlyBaseID:FBgn0051719 Length:739 Species:Drosophila melanogaster
Sequence 2:NP_592881.1 Gene:SPAC18B11.02c / 2542607 PomBaseID:SPAC18B11.02c Length:394 Species:Schizosaccharomyces pombe


Alignment Length:461 Identity:163/461 - (35%)
Similarity:244/461 - (52%) Gaps:87/461 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   272 KAKRPGFTDERYQETSYYMENGLRKVYPYYFTFTTFTKGRWVGEKILDIFSREFRAHPAEEYERC 336
            :.||....|..|    .:..:|||:|.|||:.:.||.|.||.|:.:|::|:.|||...:..||:.
pombe     4 RPKRDPLKDCEY----VFKGDGLRRVPPYYYEYITFAKLRWYGKTLLEVFNTEFRDRESGYYEKA 64

  Fly   337 IQTGTLTVNFEKVPIDYRLKHNDLLANIVHRHEVPVTCQPIKIVHMDEDIVVVNKPASIPVHPCG 401
            |:.|.:.||.:...:|..:::..::::..||||.||:.||:.|||.||..||::|||.:||||.|
pombe    65 IRNGQVKVNNQIGNVDTLIENGYIVSHHAHRHEPPVSDQPVGIVHEDESYVVIDKPAGVPVHPTG 129

  Fly   402 RYRHNTVVFILAKEFNLKNLRTIHRLDRLTSGLLLFGRSPKKARQMEQQIRNRQVEKEYICRVEG 466
            ||.||||:.||.||.....|...:|||||||||:.|.:|||.|.:|...:.::.::|||:.||.|
pombe   130 RYNHNTVLHILMKENKCSLLYPCNRLDRLTSGLMFFSKSPKAAEEMRVHMISKSLKKEYVARVIG 194

  Fly   467 VFPD-GIVECKEPIEVVSYKIGVCKVSAKGKDCTTTFQKLSQNGTTSVVLCKPLTGRMHQIRVHL 530
            .||: |.|.|..|:..|:..:|:.::...||:.:|.|::::.:|.||:|||||||||.||:||||
pombe   195 EFPNSGEVICDAPLLTVAPTLGLNRIHPDGKEASTVFKRIAFDGHTSLVLCKPLTGRTHQLRVHL 259

  Fly   531 QYLGYPILNDPLY-NHEVFGPLKGRSGDIGGKSDEELIRDLINIHNAENWLGIDCDSDISMFKST 594
            |||||||.|||:| |..|:||..|::|:   .|:|.:|..|..|...                  
pombe   260 QYLGYPIANDPIYANKRVWGPSLGKNGE---GSNESVIMRLSEIGKT------------------ 303

  Fly   595 KDEADRESLSSEHTSVVHHSDDDGCVNSRETTPPCNEPQQPENSVKLLETTNAVKEYQVAAQKSS 659
                                                            ||.:.:.:|:....::.
pombe   304 ------------------------------------------------ETASPLLQYEWYTNETE 320

  Fly   660 SEICPAPLDAVESPLNGGGCNVGKVTVDEHCYECKVH-YRDPKSKDLIMYLHAWKYKGPGWEYET 723
            :| ..|..|.          .:|::...:||.||... |.||..::|.::|||.||:...|.|:|
pombe   321 AE-AKARRDK----------RLGELLTGKHCSECGTPLYSDPSPEELGIWLHALKYESKDWSYKT 374

  Fly   724 ELPNWA 729
            :||.||
pombe   375 QLPKWA 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RluA-1NP_723592.1 Auts2 21..>162 CDD:291981
PseudoU_synth_ScRIB2 363..547 CDD:211331 97/185 (52%)
SPAC18B11.02cNP_592881.1 rluA_subfam 39..364 CDD:161659 140/404 (35%)
PseudoU_synth_ScRIB2 90..380 CDD:211331 132/369 (36%)
Auto_anti-p27 330..356 CDD:294466 8/25 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 150 1.000 Domainoid score I1102
eggNOG 1 0.900 - - E1_COG0564
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 272 1.000 Inparanoid score I703
OMA 1 1.010 - - QHG51879
OrthoFinder 1 1.000 - - FOG0002443
OrthoInspector 1 1.000 - - otm47324
orthoMCL 1 0.900 - - OOG6_100211
Panther 1 1.100 - - LDO PTHR21600
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1681
SonicParanoid 1 1.000 - - X1265
TreeFam 1 0.960 - -
1312.860

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