DRSC/TRiP Functional Genomics Resources

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Protein Alignment LManII and LManI

DIOPT Version :9

Sequence 1:NP_609408.1 Gene:LManII / 34437 FlyBaseID:FBgn0027611 Length:1080 Species:Drosophila melanogaster
Sequence 2:NP_001260350.1 Gene:LManI / 34436 FlyBaseID:FBgn0032253 Length:950 Species:Drosophila melanogaster


Alignment Length:1059 Identity:497/1059 - (46%)
Similarity:655/1059 - (61%) Gaps:145/1059 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 MLNVHLVAHTHDDVGWLKTVDQYYYGSETKIQKAGVQYIIDSVVEALLRDPEKRFIYVESAFFFK 110
            |:|||||.|:|||||||||||||||||:.|||.||||||:|:|||.||:|..:|||.||:.||.|
  Fly     1 MINVHLVPHSHDDVGWLKTVDQYYYGSQNKIQHAGVQYILDTVVEELLKDSSRRFIQVETFFFAK 65

  Fly   111 WWKEQKPKVQEAVKMLVEQGRLEFIGGAWSMNDEATTHYQSVIDQFSWGLRLLNDTFGECGRPRV 175
            |:.||...||.|||.||.||||||.|||||||||||.|||||:|||:.|||.|.||||:||||.|
  Fly    66 WYSEQTETVQRAVKKLVAQGRLEFAGGAWSMNDEATVHYQSVVDQFNLGLRYLKDTFGDCGRPTV 130

  Fly   176 GWQIDPFGHSREMASMFAQMGFDGMFFGRLDYQDKDERLMTKNAEMIWHGSANLGEEADLFSGAL 240
            |||||||||||||||:||||.|:|.||.|:||.||.:|::....||||..|.:| :.:::|:|.|
  Fly   131 GWQIDPFGHSREMASIFAQMAFNGEFFARMDYVDKKQRMLDLEMEMIWQSSESL-KNSNIFTGML 194

  Fly   241 YNNYQAPDGFCFDILCNDAPIIDGKHSPDNNVKERIDTFLDFAKTQSQYYRTNNIIVTMGGDFTY 305
            ||:|.||.||||||.|.|||||||: |.||||..|:..|:|:.|..|:.||:.:|:|.||.||.|
  Fly   195 YNHYSAPPGFCFDINCEDAPIIDGE-SYDNNVDARVSEFIDYVKNMSKSYRSTHIMVPMGDDFQY 258

  Fly   306 QAAQVYYKNLDKLIRYGNERQANGSNINLLYSTPSCYLKSLHDAGITWPTKSDDFFPYASDPHAY 370
            :.|.|.:||:||||:|.|:||:.||.:|:.||||||||..||....|||.|::|||||:||.|:|
  Fly   259 EDAAVNFKNMDKLIKYVNDRQSTGSQVNVFYSTPSCYLYELHQLKQTWPNKTEDFFPYSSDSHSY 323

  Fly   371 WTGYFTSRPTLKRFERDGNHFLQVCKQLSALAPKKPEEFDPHLTFMRETLGIMQHHDAITGTEKE 435
            ||||||||||.|||.||||||.|..||||.||.....::...|..:.:.:||||||||:|||||:
  Fly   324 WTGYFTSRPTQKRFHRDGNHFFQTVKQLSVLANLSGTQYSEDLDNLSQAMGIMQHHDAVTGTEKQ 388

  Fly   436 KVALDYAKRMSVAFRACGATTRNALNQLTVQSKDNVKDTSAKYVFEFKTCALLNITSCPVSE--A 498
            .||.||.:.:..|......:.|:||..||     |:  ||.    ||::|..|||:.|..::  |
  Fly   389 AVASDYDRLLFKAIVGAENSARDALRSLT-----NL--TSG----EFESCLELNISVCAFTQDTA 442

  Fly   499 NDRFALTLYNPLAHTVNEYVRIPVPYSNYRIIDNKGVTLESQAVPIPQVLIDIKHRNSTAKYEIV 563
            |: ..:||.|||||:..:|||:|....||.:.|.||..:.|:.||:|..::.::||.:..::|:|
  Fly   443 NN-VIVTLVNPLAHSSTQYVRVPAKNENYIVTDEKGREVFSEVVPVPWQVLALEHRPNDTQHELV 506

  Fly   564 FLATNIPALGYRTYYVEKLDSTEGNTRSKALP--------------KRTSSVTVIGNSHIQLGFD 614
            |.|:           |:|:    .|...:.||              :|:.....:..|.::|.||
  Fly   507 FEAS-----------VDKI----ANFLIRVLPSPKNIAEDQVQFPVERSQDELTVETSLVKLTFD 556

  Fly   615 -TNGFLSEVTADGLTRLVSQEFLFYEGAVGNNAEFLNRSSGAYIFRPNENKIHFATDQVEIEVYK 678
             |.|.|..|..:|.|..:.|.|..|:|..|||.|..|||||||:||| ...|....::||:..|.
  Fly   557 TTTGGLKTVKMNGFTENIQQTFGIYKGYRGNNGESKNRSSGAYVFRP-YGDIEIVNNKVELSFYN 620

  Fly   679 GDLVHEVHQKFNDWISQVVRVYNKDSYAEFEWLVGPIPIDDGIGKEVITRFNSDIASDGIFRTDS 743
            |..|.||||..|:|||||:|:|...:..||||||||||.||.:|||:||||:|:|:|.|.|.|||
  Fly   621 GTKVKEVHQHVNEWISQVIRIYEDVNRVEFEWLVGPIPTDDDVGKEIITRFSSNISSKGKFYTDS 685

  Fly   744 NGREMIKRKINHRDTWSVKINEAVAGNYYPITTKIDVEDDTARMAILTDRAQGGSSLKDGSLELM 808
            ||||:::|:.|.|:.::..::||::|||||:|.:|.::||..|:.:|.||||||:|||||.||||
  Fly   686 NGREILERERNQREHFTPDMSEAISGNYYPVTGQISLQDDEKRITLLNDRAQGGTSLKDGELELM 750

  Fly   809 VHRRLLKDDAFGVGEALNETEYGDGLIARGKHHLFFGKSTDREGVSLKGIERLTQLEKLLPTWKF 873
            :|||||.|||||||||||||:||.|||||||.:|..      :.|..|..:||.|.:.....|||
  Fly   751 LHRRLLNDDAFGVGEALNETQYGTGLIARGKIYLIL------DAVDGKPNQRLLQHQLDQHFWKF 809

  Fly   874 FSNMEDYSADEWQTAFTNIFSGISLV----------LPKPVHLLTLEPWHENQLLVRFEHIMENG 928
            ||..                :|::.|          :|:.|.||:|||:.::|:|:|.|:....|
  Fly   810 FSKS----------------NGVASVNRNMIPDFFGIPESVELLSLEPYSKDQILIRLENFNTEG 858

  Fly   929 EDASYSQPVQFNVKNVLSAFDVEGIRETTLDGNAWLDESRRLQFAPDPEEAAFNTYATFSQPAES 993
                  ..|.||:..:..:.|...|.|||||||..|::.:|.:||.|         .|.|.|:  
  Fly   859 ------NVVSFNIYPLFESLDGYQIWETTLDGNMLLEDVKRFKFAQD---------GTGSIPS-- 906

  Fly   994 VHLLSAEKPMLGVKYADEALPAGQLGAESNRIRRETETRQEKKDEGRSSKSTEGPYNSFKSDSSN 1058
                       .|:|                                    ...|:|...::|:.
  Fly   907 -----------SVEY------------------------------------YHAPHNPLTANSTM 924

  Fly  1059 QE--YIIELSPMEIRTFIV 1075
            ..  :::.|.||:|||||:
  Fly   925 NASGFVVTLVPMQIRTFII 943

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LManIINP_609408.1 GH38N_AMII_LAM_like 47..323 CDD:212121 180/275 (65%)
Alpha-mann_mid 370..445 CDD:214875 45/74 (61%)
Glyco_hydro_38C 502..957 CDD:285047 198/479 (41%)
LManINP_001260350.1 GH38N_AMII_LAM_like 2..276 CDD:212121 180/275 (65%)
Alpha-mann_mid 323..398 CDD:286360 45/74 (61%)
Glyco_hydro_38C 536..941 CDD:285047 191/491 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450129
Domainoid 1 1.000 310 1.000 Domainoid score I311
eggNOG 1 0.900 - - E1_KOG1959
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 649 1.000 Inparanoid score I170
Isobase 1 0.950 - 0 Normalized mean entropy S4230
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D201312at2759
OrthoFinder 1 1.000 - - FOG0001724
OrthoInspector 1 1.000 - - otm24899
orthoMCL 1 0.900 - - OOG6_101099
Panther 1 1.100 - - P PTHR11607
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1279
1211.750

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