DRSC/TRiP Functional Genomics Resources

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Protein Alignment LManII and LManV

DIOPT Version :9

Sequence 1:NP_609408.1 Gene:LManII / 34437 FlyBaseID:FBgn0027611 Length:1080 Species:Drosophila melanogaster
Sequence 2:NP_001285763.1 Gene:LManV / 34205 FlyBaseID:FBgn0032068 Length:982 Species:Drosophila melanogaster


Alignment Length:1083 Identity:483/1083 - (44%)
Similarity:671/1083 - (61%) Gaps:129/1083 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LGCLIHDADLRSIQPKASQ--CGYQSCHPTKPNMLNVHLVAHTHDDVGWLKTVDQYYYGSETKIQ 77
            ||.::..|.| ::|.|::|  |||:|||.||.||:|:|||.|:||||||||||||||||....||
  Fly     4 LGIVLCVAFL-ALQAKSAQAVCGYESCHETKSNMINIHLVPHSHDDVGWLKTVDQYYYGHRNNIQ 67

  Fly    78 KAGVQYIIDSVVEALLRDPEKRFIYVESAFFFKWWKEQKPKVQEAVKMLVEQGRLEFIGGAWSMN 142
            .||||||||:|:..|:::|::|||.||::||.|||.||...::..|||||.:|||:||.||||||
  Fly    68 HAGVQYIIDTVISELIKNPDRRFIQVETSFFSKWWNEQSETMRAVVKMLVNEGRLQFINGAWSMN 132

  Fly   143 DEATTHYQSVIDQFSWGLRLLNDTFGECGRPRVGWQIDPFGHSREMASMFAQMGFDGMFFGRLDY 207
            |||..:||||||||:.||:.|:||||.||||||||||||||||||.||::|||||||.||.|:|:
  Fly   133 DEAAVNYQSVIDQFTVGLKFLDDTFGVCGRPRVGWQIDPFGHSREQASIYAQMGFDGEFFSRMDH 197

  Fly   208 QDKDERLMTKNAEMIWHGSANLGEEADLFSGALYNNYQAPDGFCFDILCNDAPIIDGKHSPDNNV 272
            .||..|:.....||||..|.:| .:..||:|.||..|....|||||:.|:|.|||| ..|.||||
  Fly   198 NDKGRRMNDLALEMIWDASESL-SQVKLFTGLLYTFYWDTPGFCFDVHCSDDPIID-SDSYDNNV 260

  Fly   273 KERIDTFLDFAKTQSQYYRTNNIIVTMGGDFTYQAAQVYYKNLDKLIRYGNERQANGSNINLLYS 337
            |.|:|.|:.:|...::.:|||:|::.|||||.|:.|:|.|||:||||:|.||||::||..|::||
  Fly   261 KSRVDDFIAYAAQVAEKFRTNHIMIPMGGDFQYEDAEVNYKNMDKLIKYVNERQSSGSKYNIIYS 325

  Fly   338 TPSCYLKSLHDAGITWPTKSDDFFPYASDPHAYWTGYFTSRPTLKRFERDGNHFLQVCKQLSALA 402
            ||:|||.|:|.:..::|.|:.|||||.||.:::||||:|||||.|||||||||.|||.|||||.|
  Fly   326 TPTCYLNSVHKSVQSYPNKTLDFFPYGSDTNSFWTGYYTSRPTQKRFERDGNHILQVAKQLSAFA 390

  Fly   403 PKKPEEFDPHLTFMRETLGIMQHHDAITGTEKEKVALDYAKRMSVAFRACGATTRNALNQLTVQS 467
            .....:....|.::||.:|:||||||||||||:.|:.||.:.:..|......|..:||.:||   
  Fly   391 ELSSTQQKEDLEYLREIMGVMQHHDAITGTEKQHVSDDYDRILYDAIVGGVKTAGDALRKLT--- 452

  Fly   468 KDNVKDTSAKYVFEFKTCALLNITSCP-VSEANDRFALTLYNPLAHTVNEYVRIPVPYSNYRIID 531
              |:.:.      ||::|..|||:.|. ..:..|...:||||.||||..:|||:||...||::.|
  Fly   453 --NLPNG------EFESCLQLNISECAFTKDGADNVVVTLYNALAHTTKQYVRVPVKNENYQVTD 509

  Fly   532 NKGVTLESQAVPIPQVLIDIKHRNSTAKYEIVFLATNIPALGYRTYYVEKLDSTEGNTRSKAL-- 594
            .||..:.|:.||:|..::.::.|:|..::|:||.| ::..:.  .||::|:||.|.:...:.:  
  Fly   510 EKGRVVASEIVPVPAEVLALEFRDSDTQHELVFKA-SVDKIA--NYYIKKVDSKESSNGVRVISQ 571

  Fly   595 PKRTSSV-----TVIGNSHIQLGFDT-NGFLSEVTADGLTRLVSQEFLFYEGAVGNNAEFLNRSS 653
            ||..:..     |::..|.|:|..|. .|.|..|..:|::..:.|.:..|.          ...|
  Fly   572 PKANAETYDDEETIVQTSLIKLVLDNKTGLLKRVEMNGVSENIEQSYGLYR----------TYDS 626

  Fly   654 GAYIFRP-NENKIHFATDQVEIEVYKGDLVHEVHQKFNDWISQVVRVYNKDSYAEFEWLVGPIPI 717
            |||:||. |:.......|.||..||.|.||.||||:|:::||||:|:.....|.||||||||||:
  Fly   627 GAYVFRQYNQGDFVIQEDGVEFTVYDGALVKEVHQRFSEYISQVIRISEDKPYVEFEWLVGPIPV 691

  Fly   718 DDGIGKEVITRFNSDIASDGIFRTDSNGREMIKRKINHRDTWSVKIN-EAVAGNYYPITTKIDVE 781
            ::..|.||:|.|:|:|||:|:|.|||||||:|:|:.:.|:.::.::. :..:|||||||::|.::
  Fly   692 EEEFGTEVVTIFSSEIASNGVFYTDSNGRELIRREKDKREDFTPELAVQPTSGNYYPITSRIALQ 756

  Fly   782 DDTARMAILTDRAQGGSSLKDGSLELMVHRRLLKDDAFGVGEALNETEYGDGLIARGKHHLFFGK 846
            |...|:|||.||||||:|:|||.:|||:||||::||.:||||||||.:||..||||||..|....
  Fly   757 DSNKRLAILNDRAQGGTSMKDGQIELMLHRRLVRDDGYGVGEALNEEKYGQPLIARGKVFLILNA 821

  Fly   847 STDREGVSLKGIERLTQLEKLLPTWKFFSNM--EDYSADEWQTAFTNIFSGISLVLPKPVHLLTL 909
            :.:....     ||..:.|..||.|||||..  ...:|.:...:|.:        .||.||||||
  Fly   822 ADESTSA-----EREAEKEFHLPLWKFFSKNTGSTTAAAKSVPSFDD--------FPKSVHLLTL 873

  Fly   910 EPWHENQLLVRFEHIMENGEDASYSQPVQFNVKNVLSAFDVEGIRETTLDGNAWLDESRRLQFAP 974
            ||::::::|:|    :||.:|....:.|.||::.:....:...|||||||||..|.:.::.:|  
  Fly   874 EPFNDDEILLR----VENFKDHIEGKVVSFNIRPIFDYLNGVEIRETTLDGNLPLSDMKQFKF-- 932

  Fly   975 DPEEAAFNTYATFSQPAESVHLLSAEKPMLGVKYADEALPAGQLGAESNRIRRETETRQEKKDEG 1039
                                |.                                         ||
  Fly   933 --------------------HA-----------------------------------------EG 936

  Fly  1040 RSSKSTEGPY--NSFKSDSSNQ-----EYIIELSPMEIRTFIV 1075
            ...:.:|..|  :|.|..|:||     |:.:.|.||:|||||:
  Fly   937 SGIRGSEPEYYTSSHKPLSANQTQDAAEFAVTLYPMQIRTFII 979

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LManIINP_609408.1 GH38N_AMII_LAM_like 47..323 CDD:212121 167/275 (61%)
Alpha-mann_mid 370..445 CDD:214875 46/74 (62%)
Glyco_hydro_38C 502..957 CDD:285047 186/466 (40%)
LManVNP_001285763.1 GH38N_AMII_LAM_like 37..311 CDD:212121 167/275 (61%)
Alpha-mann_mid 358..433 CDD:286360 46/74 (62%)
Glyco_hydro_38C 481..977 CDD:285047 210/588 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450128
Domainoid 1 1.000 310 1.000 Domainoid score I311
eggNOG 1 0.900 - - E1_KOG1959
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 649 1.000 Inparanoid score I170
Isobase 1 0.950 - 0 Normalized mean entropy S4230
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D201312at2759
OrthoFinder 1 1.000 - - FOG0001724
OrthoInspector 1 1.000 - - otm24899
orthoMCL 1 0.900 - - OOG6_101099
Panther 1 1.100 - - P PTHR11607
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1279
1211.750

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