DRSC/TRiP Functional Genomics Resources

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Protein Alignment LManII and Man2a1

DIOPT Version :9

Sequence 1:NP_609408.1 Gene:LManII / 34437 FlyBaseID:FBgn0027611 Length:1080 Species:Drosophila melanogaster
Sequence 2:NP_037111.2 Gene:Man2a1 / 25478 RGDID:3038 Length:1148 Species:Rattus norvegicus


Alignment Length:1131 Identity:287/1131 - (25%)
Similarity:469/1131 - (41%) Gaps:258/1131 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 LNVHLVAHTHDDVGWLKTVDQYYYGSETKIQKAGVQYIIDSVVEALLRDPEKRFIYVESAFFFKW 111
            |.|.:|.|:|:|.|||||.:.|:        :...|||.:::|..|..|..::||:.|.::..||
  Rat   165 LQVFVVPHSHNDPGWLKTFNDYF--------RDKTQYIFNNMVLKLKEDSSRKFIWSEISYLAKW 221

  Fly   112 WK-EQKPKVQEAVKMLVEQGRLEFIGGAWSMNDEATTHYQSVIDQFSWGLRLLNDTFGECGRPRV 175
            |. ...|| :||||.|::.|:||.:.|.|.|.|||||||.::|||...|.:.|....|.  :||.
  Rat   222 WDIIDNPK-KEAVKSLLQNGQLEIVTGGWVMADEATTHYFALIDQLIEGHQWLEKNLGV--KPRS 283

  Fly   176 GWQIDPFGHSREMASMFAQMGFDGMFFGRLDYQDKDERLMTKNAEMIWHGSANLGEEADLFSGAL 240
            ||.|||||||..|..:..:.||..|...|:.|..|....:.|..|..|..:.:||...|:....:
  Rat   284 GWAIDPFGHSPTMTYLLKRAGFSHMLIQRVHYSVKKHFSLQKTLEFFWRQNWDLGSTTDILCHMM 348

  Fly   241 -YNNYQAPDGFCFDILCNDAPII----DGKHSP----------------DNNVKERIDTFLDFAK 284
             :.:|..|.      .|...|.|    |.|..|                ..||:.|....||..:
  Rat   349 PFYSYDIPH------TCGPDPKICCQFDFKRLPGGRYGCPWGVPPEAISPGNVQSRAQMLLDQYR 407

  Fly   285 TQSQYYRTNNIIVTMGGDF---TYQAAQVYYKNLDKLIRYGNERQANGSNINLLYSTPSCYLKSL 346
            .:|:.:||..::..:|.||   .|....:.|:|.::|..|.|.:.  ...:.:.:.|.|.|..:|
  Rat   408 KKSKLFRTKVLLAPLGDDFRFSEYTEWDLQYRNYEQLFSYMNSQP--HLKVKIQFGTLSDYFDAL 470

  Fly   347 HDA--------GITWPTKSDDFFPYASDPHAYWTGYFTSRPTLKRFERDGNHFLQVCKQLSALAP 403
            ..:        ...:|..|.|||.||.....||:|||||||..||.:|.....|:..:.|..||.
  Rat   471 EKSVAAEKKGGQSVFPALSGDFFTYADRDDHYWSGYFTSRPFYKRMDRIMESRLRTAEILYHLAL 535

  Fly   404 KKPEEF-------DPH---LTFMRETLGIMQHHDAITGTEKEKVALDYAKRMSVAFRACGATTRN 458
            |:.:::       .||   ||..|..||:.|||||||||.|:.|.:||..|:..:..:......:
  Rat   536 KQAQKYKINKFLSSPHYTTLTEARRNLGLFQHHDAITGTAKDWVVVDYGTRLFQSLNSLEKIIGD 600

  Fly   459 ALNQLTVQSKDNVKDTSAKYVFEFKT-----CALLNITSCPVSEANDRFALTLYNPLAHTVNEYV 518
            :...|.::.|...:...:|...|..|     .:|.......:|....|: |.:|||.....:..|
  Rat   601 SAFLLILKDKKLYQSDPSKAFLEMDTKQSSQDSLPKKNIIQLSAQEPRY-LVVYNPFEQERHSVV 664

  Fly   519 RIPVPYSNYRIIDNKGVTLESQAVPIPQVLIDIKHRNSTAKYEIVFLATNIPALGYRTYYVEKLD 583
            .:.|..:..:::.:.|..:|   |.:..|..|:: ..|.|.||:.||| ::|.||.:.|.:.:..
  Rat   665 SVRVNSATVKVLSDLGKAVE---VQVSAVWKDMR-TTSQAAYEVAFLA-HLPPLGLKVYKILESQ 724

  Fly   584 ST------------EGNTRS-----KALPKRTSSVTVIGNSHIQLGFDTNGFLSEV--TADGLTR 629
            |:            :|...|     |.:.....::| |.||.:.||||.:|.:.:|  ..|...:
  Rat   725 SSSSHLADYFLYNNDGQAESGIFHMKNMVDSGDAIT-IENSFLTLGFDRSGLMEKVRRKEDNKQQ 788

  Fly   630 LVSQEFLFYEGAVGNNAEFLNRSSGAYIFRPN-ENKIHFATDQVEIEVYKGDLVHEVHQKFNDWI 693
            .:..:||:|  ...|..:    .||||:|.|: :.:.:.:.....:.|.:|.:..:| ..|.:.:
  Rat   789 ELKVQFLWY--GTTNKRD----KSGAYLFLPDGQGQPYVSLRTPFVRVTRGRIYSDV-TCFLEHV 846

  Fly   694 SQVVRVYNKDSYAEFEWLVGP-------IPIDDGIGKEVITRFNSDIASDGIFRTDSNGREMIKR 751
            :..||:|:      .:.:.|.       :.|.....:|::.|.:|.|.:...:.||.||.::..|
  Rat   847 THKVRLYH------IQGIEGQSMEVSNIVDIRSVHNREIVMRISSKINNQNRYYTDLNGYQIQPR 905

  Fly   752 KINHRDTWSVKINEAVAGNYYPITTKIDVEDDTARMAILTDRAQGGSSLKDGSLELMVHRRLLKD 816
            :.      ..|:  .:..|.||::|...::|...|:.:|:.::.|.||:..|.:|:.:.|||::|
  Rat   906 RT------MAKL--PLQANVYPMSTMAYIQDAAHRLTLLSAQSLGASSMASGQIEVFMDRRLMQD 962

  Fly   817 DAFGVGEALNETEYGDGLIARGKHHLFFGKSTDREGVSLKGIERLTQLEKLLPTW--KFFSNMED 879
            |..|:|:.::     |..|......:...|   |.|:::       :.:|..|..  ...|:|  
  Rat   963 DNRGLGQGVH-----DNKITANLFRILLEK---RNGMNM-------EEDKKSPVSYPSLLSHM-- 1010

  Fly   880 YSADEWQTAFTN------IFSGISLVLPKPVHLLTLEPWHENQLLVRFEHIMENGEDASYSQPVQ 938
                  .:||.|      :.||   .||.|...|                               
  Rat  1011 ------TSAFLNHPFLPMVLSG---QLPSPAIEL------------------------------- 1035

  Fly   939 FNVKNVLSAFDVEGIRETTLDGNAWLDESRRLQFAPDPEEAAFNTYATFSQPAESVHLLSAE--K 1001
                                     |.|.|.||               .|.|.: :||::..  :
  Rat  1036 -------------------------LSEFRLLQ---------------SSLPCD-IHLVNLRTIQ 1059

  Fly  1002 PMLGVKYADEALPAGQLGAESNRIRRETETRQEKKDEGRSSKSTEGP------YNSFKSDS---- 1056
            ..:|..|:|||.....        |:..:.:...:..|....:|:|.      :|:|..:|    
  Rat  1060 SKVGKGYSDEAALILH--------RKVFDCQLSSRAMGLPCSTTQGKMSIPKLFNNFAVESFIPS 1116

  Fly  1057 ----------SNQEYIIELSPMEIRT 1072
                      :.....:.||||||.|
  Rat  1117 SLSLMHSPPDAQNTSEVSLSPMEIST 1142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LManIINP_609408.1 GH38N_AMII_LAM_like 47..323 CDD:212121 98/300 (33%)
Alpha-mann_mid 370..445 CDD:214875 37/84 (44%)
Glyco_hydro_38C 502..957 CDD:285047 103/489 (21%)
Man2a1NP_037111.2 PLN02701 127..1148 CDD:178304 287/1131 (25%)
GH38N_Man2A1 164..507 CDD:212131 113/360 (31%)
Alpha-mann_mid 502..587 CDD:214875 37/84 (44%)
Glyco_hydro_38C 733..1142 CDD:285047 107/536 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1121..1148 7/22 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1959
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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