DRSC/TRiP Functional Genomics Resources

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Protein Alignment LManII and aman-2

DIOPT Version :9

Sequence 1:NP_609408.1 Gene:LManII / 34437 FlyBaseID:FBgn0027611 Length:1080 Species:Drosophila melanogaster
Sequence 2:NP_505995.2 Gene:aman-2 / 179632 WormBaseID:WBGene00010284 Length:1145 Species:Caenorhabditis elegans


Alignment Length:941 Identity:259/941 - (27%)
Similarity:405/941 - (43%) Gaps:152/941 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 LNVHLVAHTHDDVGWLKTVDQYYYGSETKIQKAGVQYIIDSVVEALLRDPEKRFIYVESAFFFKW 111
            |.|.::.|:|.|.||:.|.:: ||..:|:       .|:|.:.:.|....|.||||.|.:||..|
 Worm   181 LEVIVIPHSHCDPGWIMTFEE-YYNRQTR-------NILDGMAKHLAEKDEMRFIYAEISFFETW 237

  Fly   112 WKEQKPKVQEAVKMLVEQGRLEFIGGAWSMNDEATTHYQSVIDQFSWGLRLLNDTFGECGRPRVG 176
            |::|..::::.||..:|.|:.|.:.|.|.|.|||..||.|:|.:...|...:.:..|:...|:..
 Worm   238 WRDQADEIKKKVKGYLEAGKFEIVTGGWVMTDEANAHYHSMITELFEGHEWIQNHLGKSAIPQSH 302

  Fly   177 WQIDPFGHSREMASMFAQMGFDGMFFGRLDYQDKDERLMTKNAEMIWHGSANLGEEADLFSGAL- 240
            |.|||||.|..|..:............|:.|..|.|..:.||.|..|..........||.|..: 
 Worm   303 WSIDPFGLSPSMPHLLTSANITNAVIQRVHYSVKRELALKKNLEFYWRQLFGSTGHPDLRSHIMP 367

  Fly   241 YNNYQAPDGFCFDILCNDAPII----DGKHSP----------------DNNVKERIDTFLDFAKT 285
            :.:|..|.      .|...|.:    |.:..|                |:||..|.:...|..:.
 Worm   368 FYSYDIPH------TCGPEPSVCCQFDFRRMPEGGKSCDWGIPPQKINDDNVAHRAEMIYDQYRK 426

  Fly   286 QSQYYRTNNIIVTMGGDFTYQAA---QVYYKNLDKLIRYGNERQANGSNINLLYSTPSCYLKSLH 347
            :||.::.|.|...:|.||.|...   ...|:|..||..|.|.:  :..|::..:.|.|.|.|.|.
 Worm   427 KSQLFKNNVIFQPLGDDFRYDIDFEWNSQYENYKKLFEYMNSK--SEWNVHAQFGTLSDYFKKLD 489

  Fly   348 DA----GITWPTKSDDFFPYASDPHAYWTGYFTSRPTLKRFERDGNHFLQVCKQLSALAPKKPE- 407
            .|    |...||.|.|||.||.....||:|||||||..|:.:|...|:|:..:....||..:.| 
 Worm   490 TAISASGEQLPTFSGDFFTYADRDDHYWSGYFTSRPFYKQLDRVLQHYLRSAEIAFTLANIEEEG 554

  Fly   408 ----EFDPHLTFMRETLGIMQHHDAITGTEKEKVALDYAKRMSVAFRACGATTRNALNQLTVQSK 468
                :....|...|..|.:.||||.:|||.|:.|.|||.::|..|..||......||..|.    
 Worm   555 MVEAKIFEKLVTARRALSLFQHHDGVTGTAKDHVVLDYGQKMIDALNACEDILSEALVVLL---- 615

  Fly   469 DNVKDTSAKYVFEFKTCALLNITSCP---VSEANDRFALTLYNPLAHTVNEYVRIPVPYSNYRII 530
             .:..|:...:.|.:    :|....|   |.:....  :.|:|.|:...||.:.|.|        
 Worm   616 -GIDSTNKMQMDEHR----VNENLLPEKRVYKIGQN--VVLFNTLSRNRNEPICIQV-------- 665

  Fly   531 DNKGVTLESQAVPI------PQVLIDIKHRNSTAK---YEIVFLATNIP--ALGYRTYYVEKLDS 584
            |:....:|:.. ||      |.:..|.:.:....|   :|:.|:.:..|  ::.:|.........
 Worm   666 DSLDAGVEADP-PIKKQQVSPVIAYDEEKKTLVVKNGIFELCFMLSLGPMESVSFRLVKNTTTSK 729

  Fly   585 TEGNTRSKALPKRT---SSVT----VIGNSHIQLGFD-TNGFLSEVTA--DGLTRLVSQEFLFYE 639
            .|..|.:.|..|.|   ||.|    .:.|..::..|| .||.:...|:  |.....::..|:.| 
 Worm   730 VEIITNNAAEFKETSFKSSSTSGDFTVKNDKVEAEFDGENGMIKRATSLVDDKPIDLNSHFIHY- 793

  Fly   640 GAVGNNAEFLN----RSSGAYIFRPNENKIHFATDQVEIEVYKGDLVHEVHQKFNDWISQVVRVY 700
            ||..:..:|.|    ..:|||:|.|:...........:..:.||::|.:|....|:.: ::::.|
 Worm   794 GARKSKRKFANGNEDNPAGAYLFLPDGEARELKKQSSDWILVKGEVVQKVFATPNNDL-KILQTY 857

  Fly   701 NKDSYAEFEWLVGPIPIDDGI------GKEVITRFNSDIASDGIFRTDSNGREMIKRKINHRDTW 759
            .  .|....|    |.:|:.:      ..|:..||:|.:.|...|.||.||.:||||:   |.| 
 Worm   858 T--LYQGLPW----IDLDNEVDVRSKENFELALRFSSSVNSGDEFFTDLNGMQMIKRR---RQT- 912

  Fly   760 SVKINEAVAGNYYPITTKIDVEDDTARMAILTDRAQGGSSLKDGSLELMVHRRLLKDDAFGVGEA 824
              |:  ....|:||::..:.:||||.||:|.:.:|.|.|||..|.:|:|:.|||..||..|:.:.
 Worm   913 --KL--PTQANFYPMSAGVYIEDDTTRMSIHSAQALGVSSLSSGQIEIMLDRRLSSDDNRGLQQG 973

  Fly   825 LNE----------------TEYGDGLIAR-GKH----HL-----------FFGKSTDREGVSLKG 857
            :.:                :..|:....| |.|    ||           ..|.:|.: .:|.|.
 Worm   974 VRDNKRTVAHFRIVIEPMSSSSGNKKEERVGFHSHVGHLATWSLHYPLVKMIGDATPK-SISSKN 1037

  Fly   858 IERLTQLEKLLPTWKFFSNMEDYSADEWQTA 888
            :|:....:..|.|::..::...|.|:|..||
 Worm  1038 VEQELNCDLHLVTFRTLASPTTYEANERSTA 1068

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LManIINP_609408.1 GH38N_AMII_LAM_like 47..323 CDD:212121 86/299 (29%)
Alpha-mann_mid 370..445 CDD:214875 31/79 (39%)
Glyco_hydro_38C 502..957 CDD:285047 113/450 (25%)
aman-2NP_505995.2 PLN02701 142..1124 CDD:178304 259/941 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1959
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3970
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.840

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