DRSC/TRiP Functional Genomics Resources

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Protein Alignment LManII and Man2b2

DIOPT Version :9

Sequence 1:NP_609408.1 Gene:LManII / 34437 FlyBaseID:FBgn0027611 Length:1080 Species:Drosophila melanogaster
Sequence 2:NP_032576.2 Gene:Man2b2 / 17160 MGIID:1195262 Length:1018 Species:Mus musculus


Alignment Length:1066 Identity:288/1066 - (27%)
Similarity:466/1066 - (43%) Gaps:212/1066 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 WLVFFCALGCLIHDADLRSIQPKASQCGYQSCHPTKPNMLNVHLVAHTHDDVGWLKTVDQYYYGS 72
            ||..   ||.|:      .:.|:|:|       |..|  :...:|.|:|.||||:.||.:     
Mouse     6 WLPL---LGQLL------LLWPRAAQ-------PAGP--IRAFVVPHSHMDVGWVFTVQE----- 47

  Fly    73 ETKIQKAGVQYIIDSVVEALLRDPEKRFIYVESAFFFKWW----KEQKPKVQEAVKMLVEQGRLE 133
               ..:|....:..:||..|:|..::|||.||..||..||    .||:   ::.|:.|:.:||||
Mouse    48 ---SMRAYAANVYTTVVAELVRGGQRRFIAVEQEFFRLWWDGVASEQQ---KQQVRQLLHEGRLE 106

  Fly   134 FIGGAWSMNDEATTHYQSVIDQFSWGLRLLNDTFGECGRPRVGWQIDPFGHSREMASMFAQMGFD 198
            |:.|...|:|||.||....|.|.:.|...|.:|||.  ||:..|.:||||.|....::||..||:
Mouse   107 FVLGGQVMHDEAVTHLDDQILQLTEGHGFLYETFGI--RPQFSWHVDPFGASATTPTLFALAGFN 169

  Fly   199 GMFFGRLDYQDKDERLMTKNAEMIWHGSANLGEEADLFSGAL-YNNYQAP--------DGFCFD- 253
            .....|:||..||.....:..:.:||||.:|..:.::|:..: :.:|..|        .||.:: 
Mouse   170 AHLISRIDYDLKDAMQEAQMLQFVWHGSPSLSGQQEIFTHVMDHYSYCTPSHIPFSNRSGFYWNG 234

  Fly   254 ILCNDAPIIDGKHSPDNNVKERI---------DTFLDFAKTQSQYYRTNNIIVTMGGDFTYQAAQ 309
            :.....|..||.:.   |:.|.:         :..:...|.::.::||.:::...|.|..:..|.
Mouse   235 VAVFPEPPPDGVYP---NMSEPVTGANIHLYAEALVANVKQRAAWFRTPHVLWPWGCDKQFFNAS 296

  Fly   310 VYYKNLDKLIRYGNERQANGSNINLLYSTPSCYLKSLHDAGITWPTKS-DDFFPYASDPHAYWTG 373
            |.:.|:|.|:.|.|:|.|. ..|::.|:|.:.|.::||...:||..:. .||.||:|:|...|||
Mouse   297 VQFDNMDPLLDYINQRTAQ-FGISVQYATLNDYFQALHATNMTWGIRDHQDFLPYSSEPLQAWTG 360

  Fly   374 YFTSRPTLKRFERDGNHFLQVCKQLSA--LAPKKPEEFDP-----HLTFMRETLGIMQHHDAITG 431
            ::|||.|||...|..:..|...:.:..  :.|......||     .|..:|..:..:||||||||
Mouse   361 FYTSRSTLKGLARQASALLYAGESMFTRYMWPDPSGTLDPTWALQQLQQLRWAVSEVQHHDAITG 425

  Fly   432 TEKEKVALDYAKRMSVAFRACGATTRNALNQLTVQSKDNVKDTSAKYVFEFKTCALLNITSCPVS 496
            ||..||...|.:.:.:....    .|..:..:.:.........:.|.:...:...:|::.:.||.
Mouse   426 TESPKVKNMYTEHLRMGMLG----VRKLMVSIALGGPPGSGTGAPKDIMGPQVTPVLSVDTRPVG 486

  Fly   497 EANDRFALTLYNPLAHTVNEYVRIPVPYSNYRIIDNKGVTLESQAVPIPQVLIDIKHRNST---A 558
                 ::.::|||||..:...:.:.|.:.|..:.|..|..:.:|.            :|||   :
Mouse   487 -----YSASVYNPLAWKITTIITLTVAFPNVSVTDELGHPVSTQI------------QNSTKDPS 534

  Fly   559 KYEIVFLATNIPALGYRTYYVEKLDSTEGNTRSKALPKRTS-----------------SVTVIGN 606
            .|:::.| |.||.|.||.|.|......:..||....|:..:                 .|.|:.:
Mouse   535 AYDLLIL-TTIPGLNYRHYQVMHARGDQAGTRELVAPRANTLKFSLKLRNQPSQEGKRLVPVMND 598

  Fly   607 SHIQLGFDTNGFLSEVTADGLTRLV--SQEFLFY-------EGAVGNNAEFLNRSSGAYIFRPNE 662
            .:|.|.......|..:......|.|  :||||.|       :|.:.:|          |:|.|| 
Mouse   599 CYILLFDQDTNMLHSIQDRQSNRTVRMTQEFLEYQANWDVKQGPISDN----------YLFAPN- 652

  Fly   663 NKIHFATDQVEIEVYKGDLVHEVHQKFNDWISQVVRVYN------KDSYA--------EFEWLVG 713
            |....:.:.|.:|:..|.||.::.|.|..:|:....:|:      ..|.|        |.::.||
Mouse   653 NTAEPSWEAVGMEMVAGTLVTDIRQYFYRYITDQEYIYSIHTRLAHPSLAGELLCQRIEQQYRVG 717

  Fly   714 PIPIDDGIGKEVITRFNSDIASDGIFRTDSNGREMIKRKINHRDTWSVKINEAVAGNYYPITTKI 778
            |:.::    :|.|.|.:||:.|..:..:|:||.:|.:|...     :.|.| .:..||||:....
Mouse   718 PLDLN----REAILRTSSDLNSQQVLYSDNNGYQMQRRPYK-----AFKSN-PIPRNYYPMVQSA 772

  Fly   779 DVEDDTARMAILTDRAQGGSSLKDGSLELMVHRRLLKDDAFGV--GEALNETEYGDGLIARGKHH 841
            .:|||.:|:.:|.:|..|.||..:|.:|:|:||||..:.|:.:  ...||:|.     |......
Mouse   773 FIEDDKSRLVLLAERPHGVSSQGNGQVEVMLHRRLWNNLAWDLKYNLTLNDTS-----IVHPVLW 832

  Fly   842 LFFG-KST-----DREGVSLK--GIERLTQLEKLLPTWKFFSNMEDYSADEWQTAFTNIFSGISL 898
            |..| |||     .|.||:|:  .:..|.:|                 ||| :|......:...:
Mouse   833 LMLGPKSTMTALHPRSGVALQHGPVVLLKEL-----------------ADE-ETPVHGPHNPWPV 879

  Fly   899 VLPKPVHL--LTLEPW-----HENQL------------------LVRFEHIMENGEDASYSQPVQ 938
            .||..:||  |::..|     |...|                  |:|..|:.|.|||...|:|..
Mouse   880 TLPPNLHLQILSVPGWTYSRSHAQHLRNLQRGHPEKPQANLQRVLLRLRHLYEAGEDPVLSRPAT 944

  Fly   939 FNVKNVLSAF-DVEGIRETTLDGNAW 963
            .::|.||... .|..:.|.:|.| .|
Mouse   945 VDLKVVLRGLGSVVAVEERSLTG-TW 969

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LManIINP_609408.1 GH38N_AMII_LAM_like 47..323 CDD:212121 89/298 (30%)
Alpha-mann_mid 370..445 CDD:214875 29/81 (36%)
Glyco_hydro_38C 502..957 CDD:285047 135/533 (25%)
Man2b2NP_032576.2 GH38N_AMII_Epman_like 27..352 CDD:212122 104/341 (30%)
Alpha-mann_mid 358..439 CDD:214875 29/80 (36%)
Glyco_hydro_38C 491..1012 CDD:285047 138/537 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1959
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11607
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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