DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LManII and Man2a2

DIOPT Version :9

Sequence 1:NP_609408.1 Gene:LManII / 34437 FlyBaseID:FBgn0027611 Length:1080 Species:Drosophila melanogaster
Sequence 2:NP_766491.2 Gene:Man2a2 / 140481 MGIID:2150656 Length:1152 Species:Mus musculus


Alignment Length:1151 Identity:293/1151 - (25%)
Similarity:442/1151 - (38%) Gaps:293/1151 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 LNVHLVAHTHDDVGWLKTVDQYYYGSETKIQKAGVQYIIDSVVEALLRDPEKRFIYVESAFFFKW 111
            |.|.:|.|:|:|.||:||.|:||        ....|:|::|:|..|..||.:||::.|.:||.||
Mouse   166 LQVFVVPHSHNDPGWIKTFDKYY--------TEQTQHILNSMVSKLQEDPRRRFLWAEVSFFAKW 222

  Fly   112 WKEQKPKVQEAVKMLVEQGRLEFIGGAWSMNDEATTHYQSVIDQFSWGLRLLNDTFGECGRPRVG 176
            |.....:.:.||:.||..|:||...|.|.|.|||.:||.:::||...|.:.|....|  ..||.|
Mouse   223 WDNISAQKRAAVRRLVGNGQLEIATGGWVMPDEANSHYFALVDQLIEGHQWLERNLG--ATPRSG 285

  Fly   177 WQIDPFGHSREMASMFAQMGFDGMFFGRLDYQDKDERLMTKNAEMIWHGSANLGEEADLFSGAL- 240
            |.:||||||..|..:..:.....|...|:.|..|.....|.:.|.:|....:.....|:|...: 
Mouse   286 WAVDPFGHSSTMPYLLRRANLTSMLIQRVHYAIKKHFAATHSLEFMWRQMWDSDSSTDIFCHMMP 350

  Fly   241 YNNYQAPDGFCFDILCNDAPII----DGKHSP----------------DNNVKERIDTFLDFAKT 285
            :.:|..|.      .|...|.|    |.|..|                :.||.:|....||..:.
Mouse   351 FYSYDVPH------TCGPDPKICCQFDFKRLPGGRINCPWKVPPRAITEANVADRAALLLDQYRK 409

  Fly   286 QSQYYRTNNIIVTMGGDFTYQAAQVY---YKNLDKLIRYGNERQANGSNINLLYSTPSCYLKSLH 347
            :|:.:|:|.::|.:|.||.|...|.:   :.|..:|..:.|.:..  .::...:.|.|.|..:|:
Mouse   410 KSRLFRSNVLLVPLGDDFRYDKPQEWDAQFFNYQRLFDFLNSKPE--FHVQAQFGTLSEYFDALY 472

  Fly   348 D-AGIT-------WPTKSDDFFPYASDPHAYWTGYFTSRPTLKRFERDGNHFLQVCKQL------ 398
            . .|:.       :|..|.|||.||.....|||||:||||..|..:|.....|:..:.|      
Mouse   473 KRTGVEPGARPPGFPVLSGDFFSYADREDHYWTGYYTSRPFYKSLDRVLEAHLRGAEILYSLALA 537

  Fly   399 ----SALAPKKPEEFDPHLTFMRETLGIMQHHDAITGTEKEKVALDYAKRMSVAFRACGATTRNA 459
                |.||.:.|......||..|.|||:.|||||||||.||.|.:||..|:..:..:......||
Mouse   538 HARRSGLAGQYPLSDFALLTEARRTLGLFQHHDAITGTAKEAVVVDYGVRLLRSLVSLKQVIINA 602

  Fly   460 LNQLTVQSKDNVKDTSAKYVFEFKTCALLNITSCPVS------------EANDRFALTLYNPLAH 512
            .:.|.:..::.       |.|:..| ..|.:....||            :::.|| :.::|||..
Mouse   603 AHYLVLGDQET-------YSFDPGT-PFLQMDDSRVSHDALPERTVIRLDSSPRF-VVVFNPLEQ 658

  Fly   513 TVNEYVRIPVPYSNYRIIDNKGVTLESQAVPIPQVLIDIKHRNSTAKYEIVF---LATNIPALGY 574
            .....|.:.|.....|::..:|..|..|        |.:...::|.....|:   :...:|.||.
Mouse   659 ERLSVVSLLVNSPRVRVLSEEGQPLSVQ--------ISVHWSSATDMVPDVYQVSVPVRLPGLGL 715

  Fly   575 RTYYVE-------KLDSTE---------GNTRSKALPKRT----SSVTVIGNSHIQLGFDTNGFL 619
            ....::       .|.|:.         ..:|..|.|.|.    :|...|.|.::|:.|      
Mouse   716 GVLQLQPDLDGPYTLQSSVRVYLNGVKLSVSRQSAFPVRVVDSGASDFAISNRYMQVWF------ 774

  Fly   620 SEVTADGLTRLVSQ--------------EFLFYEGAVGNNAEFLNRSSGAYIFRP-NENKIHFAT 669
                 .|||.|:..              |||.|......:      .||||:|.| :|.|.:...
Mouse   775 -----SGLTGLLKSIRRVDEEQEQQMELEFLVYGTRTSKD------KSGAYLFLPDSEAKPYVPK 828

  Fly   670 DQVEIEVYKGDLVHEV---HQKFNDWISQVVRVYNKDSYAEFEWLVG----------PIPIDDGI 721
            ....:.|.:|....||   ::.|:    ||:|:||         |.|          .:.|.|.:
Mouse   829 KPPVLRVTEGPFFSEVAVYYEHFH----QVIRLYN---------LPGVEGLSLDMSFQVDIRDYV 880

  Fly   722 GKEVITRFNSDIASDGIFRTDSNG-----REMIKRKINHRDTWSVKINEAVAGNYYPITTKIDVE 781
            .||:..|.::||.|.|.|.||.||     |:.:|:.             .:..|:||:.....::
Mouse   881 NKELALRIHTDIDSQGTFFTDLNGFQIQPRQYLKKL-------------PLQANFYPMPVMAYIQ 932

  Fly   782 DDTARMAILTDRAQGGSSLKDGSLELMVHRRLLKDDAFGVGEALNETEYGDGLIARGKHHLFFGK 846
            |...|:.:.|.:|.|.|||.:|.||:::.|||::||..|:|:.|.     |..|...:..|...:
Mouse   933 DSQRRLTLHTAQALGVSSLGNGQLEVILDRRLMQDDNRGLGQGLK-----DNKITCNRFRLLLER 992

  Fly   847 STDREGVSLKGIERLTQLEKLLP--TWKFFSN---MEDYSADEWQTAFTNIFSGISLVLPKPVHL 906
            .|.......:..||.|....||.  |..:.|.   :...:..:..:.....|..::..||...||
Mouse   993 RTTMSPEVHQEQERSTSYPSLLSHLTSMYLSTPPLVLPVAKRQGTSPALRSFHPLASPLPCDFHL 1057

  Fly   907 LTLE--------PWHENQLLVRFEHIMENGEDASYSQPVQFNVKNVLSAFDVEGIRETTLDGNAW 963
            |.|.        |..::.|::.     ..|.|..      ...||:       |...||..|...
Mouse  1058 LNLRMLPAEDTLPATDSALILH-----RKGFDCG------LEAKNL-------GFNCTTSQGKLA 1104

  Fly   964 LDESRRLQFAPDPEEAAFNTY-ATFSQPAESVHLLSAEKPMLGVKYADEALPAGQLGAESNRIRR 1027
            |.             :.|:.. .||.||.....|.....|                         
Mouse  1105 LG-------------SLFHGLDVTFLQPTSLTLLYPLASP------------------------- 1131

  Fly  1028 ETETRQEKKDEGRSSKSTEGPYNSFKSDSSNQEYIIELSPMEIRTF 1073
                          |.||:                |.|.||||.||
Mouse  1132 --------------SNSTD----------------ISLEPMEISTF 1147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LManIINP_609408.1 GH38N_AMII_LAM_like 47..323 CDD:212121 92/299 (31%)
Alpha-mann_mid 370..445 CDD:214875 37/84 (44%)
Glyco_hydro_38C 502..957 CDD:285047 118/523 (23%)
Man2a2NP_766491.2 PLN02701 140..1151 CDD:178304 293/1151 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1959
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3970
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

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