DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LManII and man2b2

DIOPT Version :9

Sequence 1:NP_609408.1 Gene:LManII / 34437 FlyBaseID:FBgn0027611 Length:1080 Species:Drosophila melanogaster
Sequence 2:NP_001106515.1 Gene:man2b2 / 100127706 XenbaseID:XB-GENE-1006292 Length:990 Species:Xenopus tropicalis


Alignment Length:1181 Identity:309/1181 - (26%)
Similarity:484/1181 - (40%) Gaps:306/1181 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VWLVFFCALGCLIHDADLRSIQPKASQCGYQSCHPTKPNMLNVHLVAHTHDDVGWLKTVDQYYYG 71
            |.||...|.||:               |    .|..:|  :...::.|:|.||||:.||.:..: 
 Frog     3 VLLVLLSAWGCV---------------C----THSAQP--IQAFVIPHSHMDVGWVYTVQESMH- 45

  Fly    72 SETKIQKAGVQYIIDSVVEALLRDPEKRFIYVESAFFFKWWKEQKPKVQ-EAVKMLVEQGRLEFI 135
                   |....:..:|||.|:|...:|||.||..||..|||.....|: :.|..|:.:|||||:
 Frog    46 -------AYAANVYTTVVEELMRGDRRRFIVVEQEFFRLWWKLFAGNVEKQQVHQLMREGRLEFV 103

  Fly   136 GGAWSMNDEATTHYQSVIDQFSWGLRLLNDTFGECGRPRVGWQIDPFGHSREMASMFAQMGFDGM 200
            .|...|:|||.|.....|.|.:.|...:.:|||.  |||..|.:||||.|....::||..||:|.
 Frog   104 IGGQVMHDEALTTIDDQILQLTEGHGFIYETFGV--RPRFSWHVDPFGASAASPTLFAMAGFNGH 166

  Fly   201 FFGRLDYQDKDERLMTKNAEMIWHGSANLGEEADLFSGAL---------YNNYQAPDGFCFD-IL 255
            ...|:||..|.:....|..:.||..|.:|.::.::|:..:         |..:....||.:: |.
 Frog   167 LISRIDYDTKADMQNGKELQFIWRASPSLSDKQEIFTHVMDQYSYCTPSYIPFSDRSGFYWNGIA 231

  Fly   256 CNDAPIIDGKHSPDNNVKERIDTFLDFAKT-------QSQYYRTNNIIVTMGGDFTYQAAQVYYK 313
            ....|..||.: |:.::....||...:|:|       ::.::|:::::...|.|..:..|.|.:.
 Frog   232 VFPDPPKDGMY-PNMSLPVTADTIHPYAETMVKNIKERAAWFRSSDVLWPWGCDKQFFNASVQFN 295

  Fly   314 NLDKLIRYGNERQANGSNINLLYSTPSCYLKSLHDAGITWPTK-SDDFFPYASDPHAYWTGYFTS 377
            |:|.|:.|.|:....|  :.:.|||...|.|:|::..:||..: |.||.||:||....|||::||
 Frog   296 NMDLLLDYINKHTEFG--VTVQYSTLGDYFKNLYNRNLTWGLRGSQDFLPYSSDSSQAWTGFYTS 358

  Fly   378 RPTLKRFERDGNHFLQVCKQLSALAP---KKP----------EEFDPHLTFMRETLGIMQHHDAI 429
            |..||...|..:..|...:  ||.|.   |.|          |:    |..:|..:..:||||.|
 Frog   359 RNVLKGVARRASSLLYAAE--SAFAQHLLKHPTGSVEKVWAMEQ----LRSLRWAVSEVQHHDGI 417

  Fly   430 TGTEKEKVALDYAKRMSVAFRACGATTRNALNQLTVQSKDNVKDTSAKYVFEFKTCALLNITSCP 494
            ||||..||...|...:                   :|....|:...|..|.:..:.   ...|| 
 Frog   418 TGTESPKVRDMYIANL-------------------LQGAAGVRKLMAAIVMDLYSS---QANSC- 459

  Fly   495 VSEANDRFALTLYNPLAHTVNEYVRIPVPYSNYRIIDNKGVTLESQAVPIPQVLIDIKHRNSTA- 558
               .|....:|:|||||..|..:|.:|:..|...:.|..|       .|:|..:     :|:|. 
 Frog   460 ---GNGYINITVYNPLAWDVTTFVLVPMNNSVSGVYDKFG-------QPVPAQI-----QNATEP 509

  Fly   559 --KYEIVFLATNIPALGYRTYYVEKLDSTEGNT----------------RSKALPKRTSSVTVIG 605
              .:::..|.| :..|.|..|.: ||.|.:...                |:||  ||.:.||.|.
 Frog   510 SNAFDLHILVT-LKGLSYGRYSI-KLGSCDAANDRLVTGRKITFVRQPKRNKA--KRQNLVTPIM 570

  Fly   606 NSHIQLGFDTN-GFLSEVTA--DGLTRLVSQEFLFY-------EGAVGNNAEFLNRSSGAYIFRP 660
            |....:..|.| ..|..:||  ...|..|:||||.|       :|.:.:|  :|..|:|..|   
 Frog   571 NDCYTVVIDQNTNLLHSITARESNQTVQVTQEFLEYHSNGDISKGPISDN--YLFTSTGPAI--- 630

  Fly   661 NENKIHFATDQVEIEVYKGDLVHEVHQKFNDWISQVV-------RVYNKDS---------YAEFE 709
                  .|...|.:|:..|.||.|:.|.|...|:...       |:||...         :.|..
 Frog   631 ------SAYKAVGLEIIAGKLVTEIRQYFYSNITAQTYLYAVYSRIYNVPEGYDKSLVCHHIEQS 689

  Fly   710 WLVGPIPIDDGIGKEVITRFNSDIASDGIFRTDSNGREMIKRKINHRDTWSVKINEAVAGNYYPI 774
            :.|||:.::    :|.|.|.::|:.:|.:..||:||.:|.:|:..:.||      ..||.||||:
 Frog   690 YRVGPMDLN----RESIIRTSTDLRTDRLIYTDNNGYQMQRRQFKNYDT------NTVARNYYPM 744

  Fly   775 TTKIDVEDDTARMAILTDRAQGGSSLKDGSLELMVHRRLLKDDAFGVGE--ALNETEYGDGLIAR 837
            .....:||::.|:..|::||.|.||..:|.:|:|:||||..:..:.:..  .||:|.     :.|
 Frog   745 VRTAYIEDNSTRLVFLSERAHGVSSQDNGEVEIMLHRRLWNNLEWDLNYNLTLNDTS-----VVR 804

  Fly   838 GKHHLFFGKST------DREGVSLKGIERLTQLEKLLPTWKFFSNMEDYSADEWQTAFTNIFSGI 896
            ....|..|...      .|.|::|:        .:.|..:...:..|..|   ::|      :.:
 Frog   805 PTIWLMLGSRALAGALYQRLGMALE--------HRPLVIYSLHTGQEKRS---YKT------TDL 852

  Fly   897 SLVLPKPVHL--LTLEPW------HE-----------------NQLLVRFEHIMENGEDASYSQP 936
            .:.||..:||  |::..|      ||                 :::|:|.:|:.|..||...|:|
 Frog   853 PITLPDNIHLQILSIPGWFYSSRHHEHMQDIHTGNIRDNVADFHRVLLRLQHLYETNEDPVLSKP 917

  Fly   937 VQFNVKNVLSAF-DVEGIRETTLDGNAWLDESRRLQFAPDPEEAAFNTYATFSQPAESVHLLSAE 1000
            |..|::::|... .|..:.|.:|.| .|                             .:|.|...
 Frog   918 VTINLQSLLKGLGTVSLVEERSLTG-TW-----------------------------DIHTLKRW 952

  Fly  1001 KPMLGVKYADEALPAGQLGAESNRIRRETETRQEKKDEGRSSKSTEGPYNSFKSDSSNQEYIIEL 1065
            |....:|..|:              |..|                          ....::.|.|
 Frog   953 KWKANIKGTDQ--------------REHT--------------------------LGTSDFTITL 977

  Fly  1066 SPMEIRTFIVY 1076
            ||.||||..||
 Frog   978 SPKEIRTLFVY 988

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LManIINP_609408.1 GH38N_AMII_LAM_like 47..323 CDD:212121 89/293 (30%)
Alpha-mann_mid 370..445 CDD:214875 30/87 (34%)
Glyco_hydro_38C 502..957 CDD:285047 137/533 (26%)
man2b2NP_001106515.1 GH38N_AMII_Epman_like 22..346 CDD:212122 104/336 (31%)
Alpha-mann_mid 352..433 CDD:214875 30/86 (35%)
Glyco_hydro_38C 567..985 CDD:285047 124/530 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D201312at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11607
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

Return to query results.
Submit another query.