DRSC/TRiP Functional Genomics Resources

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Protein Alignment LManI and LManIII

DIOPT Version :9

Sequence 1:NP_001260350.1 Gene:LManI / 34436 FlyBaseID:FBgn0032253 Length:950 Species:Drosophila melanogaster
Sequence 2:NP_001285762.1 Gene:LManIII / 34203 FlyBaseID:FBgn0032066 Length:1003 Species:Drosophila melanogaster


Alignment Length:978 Identity:596/978 - (60%)
Similarity:747/978 - (76%) Gaps:42/978 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MINVHLVPHSHDDVGWLKTVDQYYYGSQNKIQHAGVQYILDTVVEELLKDSSRRFIQVETFFFAK 65
            |||:|||||||||:||||||||||||:::.|||||||||.||||.||.|||.||||||||.||||
  Fly    36 MINIHLVPHSHDDLGWLKTVDQYYYGNKHNIQHAGVQYIFDTVVAELSKDSRRRFIQVETGFFAK 100

  Fly    66 WYSEQTETVQRAVKKLVAQGRLEFAGGAWSMNDEATVHYQSVVDQFNLGLRYLKDTFGDCGRPTV 130
            |:.:|:||.::.||.||.:|||||.||||||||||.|:||||:|||.:||::|.|.||.||||.|
  Fly   101 WWEDQSETKKKLVKTLVNEGRLEFTGGAWSMNDEAAVNYQSVIDQFAVGLKFLNDNFGVCGRPRV 165

  Fly   131 GWQIDPFGHSREMASIFAQMAFNGEFFARMDYVDKKQRMLDLEMEMIWQSSESLKNSNIFTGMLY 195
            |||||.||||||.||:||||||:|:||||||..||.:|:.:|.:||:|.:||:|:..:.||||||
  Fly   166 GWQIDAFGHSREQASMFAQMAFDGQFFARMDQNDKNKRVDNLGLEMVWDASETLEEMDFFTGMLY 230

  Fly   196 NHYSAPPGFCFDINCEDAPIIDGESYDNNVDARVSEFIDYVKNMSKSYRSTHIMVPMGDDFQYED 260
            ||||||||||||..|:|.|||||:||||||.:||.:|::|..|::..|||.|||||||||||||:
  Fly   231 NHYSAPPGFCFDSLCQDDPIIDGKSYDNNVKSRVDDFLNYASNLAGYYRSNHIMVPMGDDFQYEN 295

  Fly   261 AAVNFKNMDKLIKYVNDRQSTGSQVNVFYSTPSCYLYELHQLKQTWPNKTEDFFPYSSDSHSYWT 325
            |.:|:|||||||||||:||::||:.|:||||..|||..||:..|::||||:||.|:|.::.|:||
  Fly   296 AYMNYKNMDKLIKYVNERQASGSKYNIFYSTAGCYLNSLHKSLQSFPNKTQDFLPHSHEAKSFWT 360

  Fly   326 GYFTSRPTQKRFHRDGNHFFQTVKQLSVLANLSGTQYSEDLDNLSQAMGIMQHHDAVTGTEKQAV 390
            |:||||||||||.|||||..|..|||||||:|||.:..:|||.|.|.|.:||||||:||||||.|
  Fly   361 GFFTSRPTQKRFERDGNHILQVAKQLSVLADLSGEEQHKDLDYLRQIMAVMQHHDAITGTEKQEV 425

  Fly   391 ASDYDRLLFKAIVGAENSARDALRSLTNLTSGEFESCLELNISVCAFTQDTANNVIVTLVNPLAH 455
            ::||||||:.||:|..|:||||||.|||..:|||:|||:||||.||||::.|::.:|||.|||||
  Fly   426 SNDYDRLLYDAILGGANTARDALRVLTNQPNGEFQSCLKLNISECAFTKENADDFMVTLYNPLAH 490

  Fly   456 SSTQYVRVPAKNENYIVTDEKGREVFSEVVPVPWQVLALEHRPNDTQHELVFEASVDKIANFLIR 520
            :||||||||.|.::|.||||||..|.||:|||||:||:||.|.|||||||||:|||:|||.:.|:
  Fly   491 TSTQYVRVPVKEDSYQVTDEKGGLVASELVPVPWEVLSLEFRNNDTQHELVFKASVNKIATYFIK 555

  Fly   521 VLPSPK--------------NIAEDQVQFP------------VERSQDELT-VETSLVKLTFDTT 558
            .:....              |..|..|:.|            :|...|:.| |:.||:||..|..
  Fly   556 KIDKTTEVDITVNTQTEQSVNEEESNVKVPKRFKKVHSLKTDLETLDDQETIVQNSLIKLVIDNN 620

  Fly   559 TGGLKTVKMNGFTENIQQTFGIYKGYRGNNGESKNRSSGAYVFRPYGDIEIVNNKVELSFYNGTK 623
            ||.||||:|||.:|:|.||||:||..|          |..|:||...|:|:|.:..:.:.|:|..
  Fly   621 TGRLKTVEMNGVSEDIDQTFGMYKTAR----------SCHYIFRQDADLELVEDAFDFTVYDGES 675

  Fly   624 VKEVHQHVNEWISQVIRIYEDVNRVEFEWLVGPIPTDDDVGKEIITRFSSNISSKGKFYTDSNGR 688
            ||||||||||||||||||||.||||||||||||:|.||::||||:|.|.|.|||.|.||||||||
  Fly   676 VKEVHQHVNEWISQVIRIYEGVNRVEFEWLVGPVPIDDELGKEIVTIFKSGISSGGVFYTDSNGR 740

  Fly   689 EILERERNQREHFTPDMSE-AISGNYYPVTGQISLQDDEKRITLLNDRAQGGTSLKDGELELMLH 752
            |::.||:::||.|:||:|| .:||||||||.:::|||..||:.|||||:|||.||:||.||:|||
  Fly   741 EMMRREKDKREDFSPDLSEQPVSGNYYPVTSRMALQDSSKRMVLLNDRSQGGASLEDGRLEMMLH 805

  Fly   753 RRLLNDDAFGVGEALNETQYGTGLIARGKIYLILDAV-DG-KPNQRLLQHQLDQHFWKFFSKSNG 815
            ||.:..|..|..||:||.|:|.|||||||::|.|:|: || ..::|:.:.::...|||||||||.
  Fly   806 RRHIFADGSGAAEAINEQQFGKGLIARGKLFLYLNAIEDGATASERVAEKEIHLPFWKFFSKSNN 870

  Fly   816 VASVNRNMIPDFFGIPESVELLSLEPYSKDQILIRLENF--NTEGNVVSFNIYPLFESLDGYQIW 878
            :.|.....:.||..:|:||.||:|||||||:||:|||||  .||||||||:|..:|:.|.|.:|.
  Fly   871 IQSDVTKTLSDFNDLPQSVHLLTLEPYSKDEILLRLENFLDQTEGNVVSFSIRQIFDDLGGLEIR 935

  Fly   879 ETTLDGNMLLEDVKRFKFAQDGTGSIPSSVEYYHAPHNPLTANSTMNASGFVVTLVPMQIRTFII 943
            |||||||:.|.|:||.||..||:|...|..||:.:.|.||.|:.|.:||.|.|||.|||||||||
  Fly   936 ETTLDGNLPLSDMKRLKFHHDGSGPSHSVPEYFTSLHKPLAADKTQDASEFSVTLKPMQIRTFII 1000

  Fly   944 QQK 946
            :::
  Fly  1001 KKE 1003

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LManINP_001260350.1 GH38N_AMII_LAM_like 2..276 CDD:212121 194/273 (71%)
Alpha-mann_mid 323..398 CDD:286360 52/74 (70%)
Glyco_hydro_38C 536..941 CDD:285047 233/422 (55%)
LManIIINP_001285762.1 GH38N_AMII_LAM_like 37..311 CDD:212121 194/273 (71%)
Alpha-mann_mid 358..433 CDD:286360 52/74 (70%)
Glyco_hydro_38C 603..998 CDD:285047 231/404 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450121
Domainoid 1 1.000 310 1.000 Domainoid score I311
eggNOG 1 0.900 - - E1_KOG1959
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 649 1.000 Inparanoid score I170
Isobase 1 0.950 - 0 Normalized mean entropy S4230
OMA 1 1.010 - - QHG55625
OrthoDB 1 1.010 - - D201312at2759
OrthoFinder 1 1.000 - - FOG0001724
OrthoInspector 1 1.000 - - otm24899
orthoMCL 1 0.900 - - OOG6_101099
Panther 1 1.100 - - P PTHR11607
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1279
1312.760

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