DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LManI and aman-2

DIOPT Version :9

Sequence 1:NP_001260350.1 Gene:LManI / 34436 FlyBaseID:FBgn0032253 Length:950 Species:Drosophila melanogaster
Sequence 2:NP_505995.2 Gene:aman-2 / 179632 WormBaseID:WBGene00010284 Length:1145 Species:Caenorhabditis elegans


Alignment Length:858 Identity:224/858 - (26%)
Similarity:373/858 - (43%) Gaps:148/858 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 INVHLVPHSHDDVGWLKTVDQYYYGSQNKIQHAGVQYILDTVVEELLKDSSRRFIQVETFFFAKW 66
            :.|.::||||.|.||:.|.::||        :...:.|||.:.:.|.:....|||..|..||..|
 Worm   181 LEVIVIPHSHCDPGWIMTFEEYY--------NRQTRNILDGMAKHLAEKDEMRFIYAEISFFETW 237

  Fly    67 YSEQTETVQRAVKKLVAQGRLEFAGGAWSMNDEATVHYQSVVDQFNLGLRYLKDTFGDCGRPTVG 131
            :.:|.:.:::.||..:..|:.|...|.|.|.|||..||.|::.:...|..::::..|....|...
 Worm   238 WRDQADEIKKKVKGYLEAGKFEIVTGGWVMTDEANAHYHSMITELFEGHEWIQNHLGKSAIPQSH 302

  Fly   132 WQIDPFGHSREMASIFAQMAFNGEFFARMDYVDKKQRMLDLEMEMIWQSSESLKNSNIF--TG-- 192
            |.|||||.|..|..:............|:.|..|::..|...:|..|:        .:|  ||  
 Worm   303 WSIDPFGLSPSMPHLLTSANITNAVIQRVHYSVKRELALKKNLEFYWR--------QLFGSTGHP 359

  Fly   193 ------MLYNHYSAP------PGFC--FDI--------NCEDAPIIDGESYDNNVDARVSEFIDY 235
                  |.:..|..|      |..|  ||.        :| |..|...:..|:||..|.....|.
 Worm   360 DLRSHIMPFYSYDIPHTCGPEPSVCCQFDFRRMPEGGKSC-DWGIPPQKINDDNVAHRAEMIYDQ 423

  Fly   236 VKNMSKSYRSTHIMVPMGDDFQYE-DAAVN--FKNMDKLIKYVNDRQSTGSQVNVF--YSTPSCY 295
            .:..|:.:::..|..|:||||:|: |...|  ::|..||.:|:|.:    |:.||.  :.|.|.|
 Worm   424 YRKKSQLFKNNVIFQPLGDDFRYDIDFEWNSQYENYKKLFEYMNSK----SEWNVHAQFGTLSDY 484

  Fly   296 LYEL--------HQLKQTWPNKTEDFFPYSSDSHSYWTGYFTSRPTQKRFHRDGNHFFQTVKQLS 352
            ..:|        .||    |..:.|||.|:.....||:|||||||..|:..|...|:.::.:...
 Worm   485 FKKLDTAISASGEQL----PTFSGDFFTYADRDDHYWSGYFTSRPFYKQLDRVLQHYLRSAEIAF 545

  Fly   353 VLANLS-----GTQYSEDLDNLSQAMGIMQHHDAVTGTEKQAVASDYDRLLFKAIVGAENSARDA 412
            .|||:.     ..:..|.|....:|:.:.||||.||||.|..|..||.:.:..|:...|:...:|
 Worm   546 TLANIEEEGMVEAKIFEKLVTARRALSLFQHHDGVTGTAKDHVVLDYGQKMIDALNACEDILSEA 610

  Fly   413 LRSLTNLTSGEFESCLELNISVCAFTQDTANNV--IVTLVNPLAHSSTQYVRV------------ 463
            |..|..:.|.......|..::.....:.....:  .|.|.|.|:.:..:.:.:            
 Worm   611 LVVLLGIDSTNKMQMDEHRVNENLLPEKRVYKIGQNVVLFNTLSRNRNEPICIQVDSLDAGVEAD 675

  Fly   464 -PAKNEN---YIVTDEKGREVFSEVVPVPWQVLALEHRPNDTQHELVFEASVDKIANFLIRVLPS 524
             |.|.:.   .|..||:.:.:   ||             .:...||.|..|:..:.:...|::.:
 Worm   676 PPIKKQQVSPVIAYDEEKKTL---VV-------------KNGIFELCFMLSLGPMESVSFRLVKN 724

  Fly   525 ---------PKNIAE-DQVQFPVERSQDELTVETSLVKLTFDTTTGGLK--TVKMNGFTENIQQT 577
                     ..|.|| .:..|....:..:.||:...|:..||...|.:|  |..::....::...
 Worm   725 TTTSKVEIITNNAAEFKETSFKSSSTSGDFTVKNDKVEAEFDGENGMIKRATSLVDDKPIDLNSH 789

  Fly   578 FGIYKGYRGN-----NGESKNRSSGAYVFRPYGDI-EIVNNKVELSFYNGTKVKEVHQHVNE--W 634
            | |:.|.|.:     ||...| .:|||:|.|.|:. |:.....:.....|..|::|....|.  .
 Worm   790 F-IHYGARKSKRKFANGNEDN-PAGAYLFLPDGEARELKKQSSDWILVKGEVVQKVFATPNNDLK 852

  Fly   635 ISQVIRIYEDVNRVEFEWLVGPIPTDDDV------GKEIITRFSSNISSKGKFYTDSNGREILER 693
            |.|...:|:.:     .|    |..|::|      ..|:..||||:::|..:|:||.||.::::|
 Worm   853 ILQTYTLYQGL-----PW----IDLDNEVDVRSKENFELALRFSSSVNSGDEFFTDLNGMQMIKR 908

  Fly   694 ERNQREHFTPDMSEAISGNYYPVTGQISLQDDEKRITLLNDRAQGGTSLKDGELELMLHRRLLND 758
            .|..:   .|..:     |:||::..:.::||..|:::.:.:|.|.:||..|::|:||.|||.:|
 Worm   909 RRQTK---LPTQA-----NFYPMSAGVYIEDDTTRMSIHSAQALGVSSLSSGQIEIMLDRRLSSD 965

  Fly   759 DAFGVGEALNETQ 771
            |..|:.:.:.:.:
 Worm   966 DNRGLQQGVRDNK 978

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LManINP_001260350.1 GH38N_AMII_LAM_like 2..276 CDD:212121 85/302 (28%)
Alpha-mann_mid 323..398 CDD:286360 30/79 (38%)
Glyco_hydro_38C 536..941 CDD:285047 67/252 (27%)
aman-2NP_505995.2 PLN02701 142..1124 CDD:178304 224/858 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1959
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.