DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LManI and Man2a1

DIOPT Version :9

Sequence 1:NP_001260350.1 Gene:LManI / 34436 FlyBaseID:FBgn0032253 Length:950 Species:Drosophila melanogaster
Sequence 2:NP_032575.2 Gene:Man2a1 / 17158 MGIID:104669 Length:1150 Species:Mus musculus


Alignment Length:1079 Identity:280/1079 - (25%)
Similarity:466/1079 - (43%) Gaps:227/1079 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 INVHLVPHSHDDVGWLKTVDQYYYGSQNKIQHAGVQYILDTVVEELLKDSSRRFIQVETFFFAKW 66
            :.|.:|||||:|.|||||.:.|:   ::|     .|||.:.:|.:|.:||||:|:..|..:.|||
Mouse   165 LQVFVVPHSHNDPGWLKTFNDYF---RDK-----TQYIFNNMVLKLKEDSSRKFMWSEISYLAKW 221

  Fly    67 YSEQTETVQRAVKKLVAQGRLEFAGGAWSMNDEATVHYQSVVDQFNLGLRYLKDTFGDCGRPTVG 131
            :.......:.|||.|:..|:||...|.|.|.||||.||.:::||...|.::|:...|  .:|..|
Mouse   222 WDIIDIPKKEAVKSLLQNGQLEIVTGGWVMPDEATPHYFALIDQLIEGHQWLEKNLG--VKPRSG 284

  Fly   132 WQIDPFGHSREMASIFAQMAFNGEFFARMDYVDKKQRMLDLEMEMIWQSSESLKN-SNIFTGML- 194
            |.|||||||..||.:..:..|:.....|:.|..||...|...:|..|:.:..|.: ::|...|: 
Mouse   285 WAIDPFGHSPTMAYLLKRAGFSHMLIQRVHYAIKKHFSLHKTLEFFWRQNWDLGSATDILCHMMP 349

  Fly   195 YNHYSAP------PGFCFDINCEDAPIIDGESY------------DNNVDARVSEFIDYVKNMSK 241
            :..|..|      |..|...:.:..|   |..|            ..||.:|....:|..:..||
Mouse   350 FYSYDIPHTCGPDPKICCQFDFKRLP---GGRYGCPWGVPPEAISPGNVQSRAQMLLDQYRKKSK 411

  Fly   242 SYRSTHIMVPMGDDF---QYEDAAVNFKNMDKLIKYVNDRQSTGSQVNVFYSTPSCYLYELHQL- 302
            .:|:..::.|:||||   :|.:..:..:|.::|..|:|.:...  :|.:.:.|.|.|...|.:. 
Mouse   412 LFRTKVLLAPLGDDFRFSEYTEWDLQCRNYEQLFSYMNSQPHL--KVKIQFGTLSDYFDALEKAV 474

  Fly   303 -------KQTWPNKTEDFFPYSSDSHSYWTGYFTSRPTQKRFHRDGNHFFQTVKQLSVLANLSGT 360
                   :..:|..:.|||.|:.....||:|||||||..||..|......:..:.|..||.....
Mouse   475 AAEKKSSQSVFPALSGDFFTYADRDDHYWSGYFTSRPFYKRMDRIMESRIRAAEILYQLALKQAQ 539

  Fly   361 QY-------SEDLDNLSQA---MGIMQHHDAVTGTEKQAVASDYDRLLFKAIVGAENSARDA--- 412
            :|       |.....|::|   :|:.|||||:|||.|..|..||...||:::...|....|:   
Mouse   540 KYKINKFLSSPHYTTLTEARRNLGLFQHHDAITGTAKDWVVVDYGTRLFQSLNSLEKIIGDSAFL 604

  Fly   413 --LRSLTNLTSGEFESCLELNISVCAFTQDTANNVIV-----------TLVNPLAHSSTQYVRVP 464
              |:......|...::.||::..  ..:||:....|:           .:.||........|.:.
Mouse   605 LILKDKKLYQSDPSKAFLEMDTK--QSSQDSLPQKIIIQLSAQEPRYLVVYNPFEQERHSVVSIR 667

  Fly   465 AKNENYIVTDEKGREVFSEVVPVPWQVLALEHRPNDTQ------HELVFEASVDKIANFLIRVLP 523
            ..:....|..:.|:       ||..||.|:.   ||.:      :|:.|.|.:..:...:.::|.
Mouse   668 VNSATVKVLSDSGK-------PVEVQVSAVW---NDMRTISQAAYEVSFLAHIPPLGLKVFKILE 722

  Fly   524 SPKN--------------IAEDQVQFPVER---SQDELTVETSLVKLTFDTTTGGLKTVKMNGFT 571
            |..:              :||:.: |.|:.   :.|.:|:|...:.:.||.:  ||.. |:....
Mouse   723 SQSSSSHLADYVLYNNDGLAENGI-FHVKNMVDAGDAITIENPFLAIWFDRS--GLME-KVRRKE 783

  Fly   572 ENIQQTFGIYKGYRGNNGESKNRSSGAYVFRP----------------------YGDI----EIV 610
            ::.|....:...:.|..  :|...||||:|.|                      |.|:    |.|
Mouse   784 DSRQHELKVQFLWYGTT--NKRDKSGAYLFLPDGQGQPYVSLRPPFVRVTRGRIYSDVTCFLEHV 846

  Fly   611 NNKVELSFYNGTKVKEVHQHVNEWISQVIRIYEDVNRVEFEWLVGPIPTDDDVGKEIITRFSSNI 675
            .:||.|....|.:.:.:.      :|.::.|....||                  ||:.|.||.|
Mouse   847 THKVRLYNIQGIEGQSME------VSNIVNIRNVHNR------------------EIVMRISSKI 887

  Fly   676 SSKGKFYTDSNGREILERERNQREHFTPDMSE-AISGNYYPVTGQISLQDDEKRITLLNDRAQGG 739
            :::.::|||.||.:|..|.         .||: .:..|.||:.....:||.|.|:|||:.::.|.
Mouse   888 NNQNRYYTDLNGYQIQPRR---------TMSKLPLQANVYPMCTMAYIQDAEHRLTLLSAQSLGA 943

  Fly   740 TSLKDGELELMLHRRLLNDDAFGVGEALNETQYGTGLIARGKIYLILD---AVDGKPNQR----- 796
            :|:..|::|:.:.|||:.||..|:|:.:::.:....|..     ::|:   ||:.:..::     
Mouse   944 SSMASGQIEVFMDRRLMQDDNRGLGQGVHDNKITANLFR-----ILLEKRSAVNMEEEKKSPVSY 1003

  Fly   797 --LLQHQLD---QHFWKFFSKSNGVASVNRNMIPDF----FGIPESVELLSL--------EPYSK 844
              ||.|...   .|.:.....|..:.|....::.:|    ..:|..:.|::|        :.||.
Mouse  1004 PSLLSHMTSSFLNHPFLPMVLSGQLPSPAFELLSEFPLLQSSLPCDIHLVNLRTIQSKMGKGYSD 1068

  Fly   845 DQILIRLENFNTEGNVVSFNIYPLFESLDGYQIWETTLDGNMLLEDVKRF-KFAQDGTGSIPSSV 908
            :..||    .:.:|....|       |..|..:..:|..|.|.:  :|.| |||.:..  :|||:
Mouse  1069 EAALI----LHRKGFDCQF-------SSRGIGLPCSTTQGKMSV--LKLFNKFAVESL--VPSSL 1118

  Fly   909 EYYHAPHNPLTANSTMNASGFVVTLVPMQIRTFIIQQKY 947
            ...|:|.:      ..|.|  .|:|.||:|.||.|:.::
Mouse  1119 SLMHSPPD------AQNMS--EVSLSPMEISTFRIRLRW 1149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LManINP_001260350.1 GH38N_AMII_LAM_like 2..276 CDD:212121 95/296 (32%)
Alpha-mann_mid 323..398 CDD:286360 32/84 (38%)
Glyco_hydro_38C 536..941 CDD:285047 108/460 (23%)
Man2a1NP_032575.2 PLN02701 127..1148 CDD:178304 280/1076 (26%)
GH38N_Man2A1 164..507 CDD:212131 109/356 (31%)
Alpha-mann_mid 502..587 CDD:214875 32/84 (38%)
Glyco_hydro_38C 757..1143 CDD:285047 107/451 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1959
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.