DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment loh and ADAMTSL2

DIOPT Version :9

Sequence 1:NP_609406.2 Gene:loh / 34435 FlyBaseID:FBgn0032252 Length:880 Species:Drosophila melanogaster
Sequence 2:XP_011517543.2 Gene:ADAMTSL2 / 9719 HGNCID:14631 Length:1021 Species:Homo sapiens


Alignment Length:990 Identity:191/990 - (19%)
Similarity:284/990 - (28%) Gaps:355/990 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 SGNVATTRQTPKVEE-VFSSPNPPQEATSSTSKKAKKKVYPYPRWDKWSDWSSCSRSCGGGVKYQ 202
            :|:..:|..||.:.. :|.....|..|..:...:|:      |.....::..|..|:.|...:..
Human   130 AGDTVSTGSTPSLRACIFLPGGSPSRAPGTGPARAR------PSGTSSAECRSVRRTGGASARSS 188

  Fly   203 VRKCINRNLLTNNQLTSNACVGYFKRYQLCNDVPCDEQSPDFRASQCSAYNDKEFHGHRYRWEPY 267
            .... .....|..:.:.:.|..........|.|.|  ..|.:.||..|             |.|.
Human   189 ASPS-TPTCTTGGRTSGSLCTRMTMSTSPANRVTC--TVPPWTASGSS-------------WSPP 237

  Fly   268 VKDDAECELNCMPFGMKSFATLNESVIDGTPCGHPAEYFRSQFWERAVCVDGACKAVQASGEIDG 332
            ........|.|     :.||.|.      .|.|.....|.:...::.    |.|:.         
Human   238 ATAHPASSLTC-----EGFACLE------NPIGCDGVLFSTHTLDKC----GICQG--------- 278

  Fly   333 LYAHSGSVSCGGLLCRPVTGIFTRNPLPEHAYIHVTTLPVGASNISITELKNSINLLVLRTSNEL 397
                      .|..|..|||.: |.......|..||.:|.||.:|.|.|.|.|.::|.|......
Human   279 ----------DGSSCTHVTGNY-RKGNAHLGYSLVTHIPAGARDIQIVERKKSADVLALADEAGY 332

  Fly   398 AIFNGENTVSESGSYEAVGAVFDYHR-IDGAEDSNGVTEWITSIGPIRDSLQLMVFTKSANNTGV 461
            ..|||...|....::...|.|..|.| :|..|  .|: |:|.:.||....|.:||:.::..:..:
Human   333 YFFNGNYKVDSPKNFNIAGTVVKYRRPMDVYE--TGI-EYIVAQGPTNQGLNVMVWNQNGKSPSI 394

  Fly   462 KYEYML----------PI---VSESEENE-------------------------MSLES------ 482
            .:||.|          ||   .|||.|::                         :.|::      
Human   395 TFEYTLLQPPHESRPQPIYYGFSESAESQGLDGAGLMGFVPHNGSLYGQASSERLGLDNRLFGHP 459

  Fly   483 ----------------------------------------------------------------- 482
                                                                             
Human   460 GLDMELGPSQGQETNEVCEQAGGGACEGPPRGKGFRDRNVTGTPLTGDKDDEEVDTHFASQEFFS 524

  Fly   483 ----SDGLLRSGME--------------------------------------------------- 492
                ||.||.:|.:                                                   
Human   525 ANAISDQLLGAGSDLKDFTLNETVNSIFAQGAPRSSLAESFFVDYEENEGAGPYLLNGSYLELSS 589

  Fly   493 DTSSSSSSRA-------------------------GRKR------IFNWKVIGFSSCTKSCGGGT 526
            |..::|||.|                         .||:      ::.||:.....|:.:|..|.
Human   590 DRVANSSSEAPFPNVSTSLLTSAGNRTHKARTRPKARKQGVSPADMYRWKLSSHEPCSATCTTGV 654

  Fly   527 QTPIIRCIRKNPLRYYSQRRCTHSVKPVLNENLLH--CNTQPCPAYWRFDDWGECRCSSSGGLRR 589
            .:....|:|.:.:. .....|....:|    ..:|  |..:.|...|....|.||..:...|.:.
Human   655 MSAYAMCVRYDGVE-VDDSYCDALTRP----EPVHEFCAGRECQPRWETSSWSECSRTCGEGYQF 714

  Fly   590 REVSCVQELASGLVIHVDKAACMEDQPPMQKQCECPKNRRRNLSRYRLSGPSESSSNSSQVKRSK 654
            |.|.|.:.|:.|....|....|        :..|..:...|...|....||.             
Human   715 RVVRCWKMLSPGFDSSVYSDLC--------EAAEAVRPEERKTCRNPACGPQ------------- 758

  Fly   655 IDGSDATAIWLVSDWNQYCSVTCGS-GVEYRTVFCDRSKAGEQRCDPSTTPESRRPCEKPACELG 718
                     |.:|:|:: |:..||. .|..|.:.|...   |:.|||:|.|...:.|..|.|: .
Human   759 ---------WEMSEWSE-CTAKCGERSVVTRDIRCSED---EKLCDPNTRPVGEKNCTGPPCD-R 809

  Fly   719 DWFTGPWSSCNGDCFDLTRTREVLCIRSQ-LITEHSECTPELKPQSVEKCSHEEVEYCAARWHYS 782
            .|....|..|:|.|......|.|.|..|. .:...|:|..|.||.::..|..:.   |.|.|...
Human   810 QWTVSDWGPCSGSCGQGRTIRHVYCKTSDGRVVPESQCQMETKPLAIHPCGDKN---CPAHWLAQ 871

  Fly   783 DWSECTKPCGGGTQRRSVRCLEYDIKMNALRESTHCRYTNREPIYRNCNVQAC--------AEVP 839
            ||..|...||.|.::|.|.|:|........|....|....:.|....|..:.|        :|..
Human   872 DWERCNTTCGRGVKKRLVLCMELANGKPQTRSGPECGLAKKPPEESTCFERPCFKWYTSPWSECT 936

  Fly   840 KT------------------------EVTPV------------------CADK-FSNCQWASQAK 861
            ||                        .|.||                  |.|: .:||..|.:..
Human   937 KTCGVGVRMRDVKCYQGTDIVRGCDPLVKPVGRQACDLQPCPTEPPDDSCQDQPGTNCALAIKVN 1001

  Fly   862 LCSYDYYRDNCCFSC 876
            ||.:.||...||.||
Human  1002 LCGHWYYSKACCRSC 1016

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lohNP_609406.2 TSP1 182..238 CDD:214559 7/55 (13%)
ADAM_spacer1 348..468 CDD:283607 38/130 (29%)
TSP1 667..716 CDD:214559 16/49 (33%)
TSP1 779..835 CDD:214559 15/55 (27%)
PLAC 847..877 CDD:285849 13/31 (42%)
ADAMTSL2XP_011517543.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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