DRSC/TRiP Functional Genomics Resources

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Protein Alignment loh and adamts15a

DIOPT Version :9

Sequence 1:NP_609406.2 Gene:loh / 34435 FlyBaseID:FBgn0032252 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_001119901.1 Gene:adamts15a / 569571 ZFINID:ZDB-GENE-060526-203 Length:958 Species:Danio rerio


Alignment Length:662 Identity:155/662 - (23%)
Similarity:255/662 - (38%) Gaps:140/662 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 KKKISINSYYELANLWHTRKDLSSPKQKPNNKEEYLENETTSKISNKSDEKVLKSSTIISLNATN 113
            |:..|:.....|.:.:.|..:|......|::..:..|     ::..|..:..:.|.|:|.:|.|:
Zfish   336 KRSCSVIEDDGLPSAFTTAHELGHVFNMPHDNVKACE-----EVFGKLQDNHMMSPTLIRINRTS 395

  Fly   114 PSTSTFKSVLETTTLPS-------------VTTKDLFESGNVATTRQTPKVEEVFSSPNPPQEA- 164
            | .|...:.:.|..|.|             :...|:....:....||........|.|.|..:| 
Zfish   396 P-WSPCSAAIITDYLDSGHGDCLLDQPEKPLALPDVLPGASYGLERQCELAFGAGSKPCPFMQAP 459

  Fly   165 ------TSSTSKKAKKKVYPYP-------------------------------RWDKWSDWSSCS 192
                  |..|..:...:...:|                               :|.||..:.|||
Zfish   460 CQRLWCTGKTRGQLVCQTRHFPWADGTSCGDGQLCMRGTCIDKQELLKTKVDGKWGKWGPFGSCS 524

  Fly   193 RSCGGGVKYQVRKCINRNLLTNNQLTSNA---CVGYFKRYQLCNDVPCDEQSPDFRASQCSAYND 254
            |:|||||:...|:|       :|.:..|.   |.|...:|:.||..||.:....:|..||.|||.
Zfish   525 RTCGGGVQLSKREC-------DNPVPVNGGKYCQGVRVKYRSCNLSPCPDTGKSYREEQCEAYNG 582

  Fly   255 KEFHGHRYR----WEP-----YVKDDAECELNCMPFGMKSFATLNESVIDGTPCGHPAEYFRSQF 310
            ...:.:|..    |.|     ..||  .|:|.|...|...|..|...|:|||||...:.      
Zfish   583 FSLNTNRLTSSVVWVPKYSGVSAKD--MCKLICRANGTGYFYVLAPKVVDGTPCSPDSS------ 639

  Fly   311 WERAVCVDGACKAVQASGEIDGLYAHSGSVSCGG--LLCRPVTGIFTRNPLPEHAYIHVTTLPVG 373
               :|||.|.|......|::...........|||  ..|:.|:|:||:   |.|.|..|..||:|
Zfish   640 ---SVCVQGKCIKAGCDGKLGSNKKSDKCGVCGGDNKNCKKVSGLFTK---PMHGYNFVVMLPMG 698

  Fly   374 ASNISITE-----LKNSINLLVLRTSNELAIFNGENTVSESGSYEAV-GAVFDYHRIDGAEDSNG 432
            :|||.|.:     :.:..|.|.::.:....:.||...||.......| |::..|      ..:.|
Zfish   699 SSNIDIRQRGYKGITSDDNYLAVKNNQGKYLLNGNYVVSAMEKDILVKGSLLRY------SGTVG 757

  Fly   433 VTEWITSIGPIRDSLQLMVFT-KSANNTGVKYEYMLPIVSESEENEMS------------LESSD 484
            .:|.:.::.|:.::|.:.|.: .......::|.:.||  .||::|:..            |....
Zfish   758 SSETLQAVKPLGEALIIEVLSVGQMTPPRIRYSFYLP--RESKDNKAQKKEEKARAENSILREEG 820

  Fly   485 GLLRSGME-DTSSSSSSRAGRKRIFN----WKVIGFSSCTKSCGGGTQTPIIRCIRKN--PLRYY 542
            |:.:.|.| |......:.|..|.|.:    |...|:..|:.:||.|.|..:::|:..:  |    
Zfish   821 GVNKGGKEADILKDKIAPAYVKDIASKPGKWVAAGWDVCSVTCGNGLQRRMVQCLGGDGGP---- 881

  Fly   543 SQRRCTHSVKPVLNENLLHCNTQPCPAYWRFDDWGECRCSSSGGLRRREVSCVQELASGLVIHVD 607
             ...|..|.||    :.:.....||| .|...||..|..:...|.:||.:.|:..:  |.::..:
Zfish   882 -GVDCEPSQKP----SAIQACGDPCP-MWDVGDWSPCSKTCGKGFKRRLLRCITTV--GKLLPRE 938

  Fly   608 KAACMEDQPPMQ 619
            |  |::.:.|.:
Zfish   939 K--CVDKKKPQE 948

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lohNP_609406.2 TSP1 182..238 CDD:214559 22/58 (38%)
ADAM_spacer1 348..468 CDD:283607 30/126 (24%)
TSP1 667..716 CDD:214559
TSP1 779..835 CDD:214559
PLAC 847..877 CDD:285849
adamts15aNP_001119901.1 Pep_M12B_propep 55..151 CDD:279848
Reprolysin 212..421 CDD:279729 18/90 (20%)
ZnMc_ADAMTS_like 212..418 CDD:239801 18/87 (21%)
ADAM_CR <452..502 CDD:301627 6/49 (12%)
TSP1 514..566 CDD:214559 22/58 (38%)
ADAM_spacer1 676..794 CDD:283607 30/126 (24%)
TSP1 903..957 CDD:214559 12/50 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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