DRSC/TRiP Functional Genomics Resources

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Protein Alignment loh and adamtsl7

DIOPT Version :10

Sequence 1:NP_609406.2 Gene:loh / 34435 FlyBaseID:FBgn0032252 Length:880 Species:Drosophila melanogaster
Sequence 2:XP_017211532.3 Gene:adamtsl7 / 556634 ZFINID:ZDB-GENE-070816-2 Length:643 Species:Danio rerio


Alignment Length:615 Identity:157/615 - (25%)
Similarity:248/615 - (40%) Gaps:89/615 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   321 CKAVQASGEIDGLYAHSGSVSC---GGLLCRPVTGIFTRNPLPEHAYIHVTTLPVGASNISITEL 382
            |:..|.  ::.|:.|..|| ||   .|.:...|..:         .|..:..:|.||..|.|.|.
Zfish    48 CEGFQV--DVCGVCAGDGS-SCELFNGTIFLSVLSV---------RYHKILDIPSGALRIKIQET 100

  Fly   383 KNSINLLVLRTSNELAIFNGENTVSESGSYEAVGAVFDYHRIDGAEDSNGVTEWITSIGPIRDSL 447
            ..:.|.|.|..:...::.||:..:...|.:.|.|..|.|.|.:......|  |.||:.||....|
Zfish   101 HKTRNYLALSMATGESVINGDWVIDRPGQFYAAGTQFTYKRPNEIRSRAG--ESITAPGPTNQEL 163

  Fly   448 QLMVFTKSANNTGVKYEYMLPIVSESEENEMSLES------SDGLLRSGMEDTSSSSSSRAGRKR 506
            .|.|..:.. :..|.|||:||..:.:..:..|..|      |.|:..........:|.|.....:
Zfish   164 NLFVIYQQP-DAAVYYEYILPKHTNTHSDAYSYSSVLPLVESHGIFPDSENSVGENSLSSFHPNQ 227

  Fly   507 I------------FNWKVIGFSSCTKSCGGGTQTPIIRCIRKNPLRYYSQRRCTHSVKPVLNENL 559
            :            ::|..:..:.|:.:||.|.:..:..|:.:.......:..|:....|  ...:
Zfish   228 VPSDSVTLEPVPLYSWMAMATTPCSTTCGTGNRQVLFGCVERATQTTVLEDLCSSITHP--GPQV 290

  Fly   560 LHCNTQPCPAYWRFDDWGECRCSSSGGLRRREVSCVQ---ELASGLVIHVDKAACMEDQPP---- 617
            ..|.:|||||:|...:|.||..:...|.:.|:|.|.|   :..|..|: |..:.|.:.:.|    
Zfish   291 EECQSQPCPAFWDVGEWSECSKTCGPGFQYRQVICRQTQGQHGSSTVV-VANSMCDDTEMPDTTS 354

  Fly   618 --MQKQC----------ECP-----KNRRRNLSRYRLSGPSESSSNSSQVKR----SKIDGSDAT 661
              ..|.|          ||.     ..|.|.:......|...|....:...|    ...|.....
Zfish   355 VCQLKICSEWQIRSEWTECSVPCGVGQRSREVVCVDNLGDIVSDEECNMALRPQDLQNCDKGVCA 419

  Fly   662 AIWLVSDWNQYCSVTCGSGVEYRTVFCDRSKAGE---QRCDPSTTPESRRPCE-KPACELGDWFT 722
            :.|..|.|::.||..|..|...|:|.|..|::..   ..||....|:....|: .|..:..:|:|
Zfish   420 SSWFYSLWSERCSADCAEGSRSRSVVCLMSQSNSLPLDDCDDEDKPDELMQCDLGPCTQRLEWYT 484

  Fly   723 GPWSSCNGDCFDLTRTREVLCIRSQ----LITEHSECTPELKPQSVEKCSHEEVEYCAARWHYSD 783
            |||..|:.:|.:.|::|.|:|:...    .:|....|:...:|.:.:.|   .::.|||:|..::
Zfish   485 GPWGQCSSECGNGTQSRGVVCVVQNGGHLEVTSDDLCSHLPRPPTAQSC---YLKSCAAQWFMTE 546

  Fly   784 WSECTKPCGGGTQRRSVRCLEYDIKMNALRESTHCRYTNREPI-YRNCNVQACAEVPKTEVTPVC 847
            ||.|::.|.||.:.|.||||..|:      .|:|......||. ...||...|.    .::...|
Zfish   547 WSSCSRSCEGGFRVREVRCLRDDL------TSSHDCDPALEPAKQEKCNTHICT----LQIDESC 601

  Fly   848 ADKFSNCQWASQAKLCSYDYYRDNCCFSCT 877
            .|.:.||....||:||.|.|||..||.||:
Zfish   602 RDMYYNCVVVVQARLCVYSYYRTTCCASCS 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lohNP_609406.2 TSP1 182..238 CDD:214559
ADAMTS_spacer1 349..468 CDD:461796 32/118 (27%)
TSP1_ADAMTS 510..567 CDD:465950 10/56 (18%)
TSP1_ADAMTS 664..715 CDD:465950 16/54 (30%)
TSP1_ADAMTS 720..768 CDD:465950 14/51 (27%)
TSP1_ADAMTS 779..835 CDD:465950 19/56 (34%)
PLAC 847..877 CDD:462560 15/29 (52%)
adamtsl7XP_017211532.3 None
Blue background indicates that the domain is not in the aligned region.

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