DRSC/TRiP Functional Genomics Resources

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Protein Alignment loh and stl

DIOPT Version :10

Sequence 1:NP_609406.2 Gene:loh / 34435 FlyBaseID:FBgn0032252 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_001097423.1 Gene:stl / 37619 FlyBaseID:FBgn0086408 Length:1136 Species:Drosophila melanogaster


Alignment Length:231 Identity:47/231 - (20%)
Similarity:75/231 - (32%) Gaps:63/231 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 PPQEATSSTSKKAKKK--------VYPY-----------PRWDKWSDWSSCSRSC---------- 195
            ||:....:|.:|..:.        ::.|           ..|.:||:.|:|...|          
  Fly   642 PPEHIPEATHEKIIRHEPNRIPPLLHDYNPMDNELPGSPSNWGEWSEPSACESGCLYGQSRRLLE 706

  Fly   196 -GGGVKYQVRKCINRNLLTNNQLTSNACVGYFKRYQLCNDVPCD----EQSPDFRASQC--SAYN 253
             ..|::...|.|:|         ..:.|:|..:|:..||...|.    :...||....|  :..:
  Fly   707 GSTGLRTLNRSCLN---------FPSRCIGRDRRFVTCNTPQCHKVPVQTINDFATQVCMQARKS 762

  Fly   254 DKEFHGHRYRWEPYVKDDAECELNC--MPFGMKSFATLNESVIDGTPC---GHPAEYFRSQFWER 313
            |.|..|...:....:  ||.|::.|  ...|.||   ...:..|||.|   .|..|       :.
  Fly   763 DPELTGEGQQLPSTL--DASCKIFCRTRTNGTKS---RRWTFPDGTTCKAKQHNPE-------DI 815

  Fly   314 AVCVDGACKAVQASGEIDGLYAHSGSVSCGGLLCRP 349
            ..|:.|.|:...........:....|. |.....||
  Fly   816 TYCISGRCERFSCDNSTSNFFKMDSSF-CEARSVRP 850

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lohNP_609406.2 TSP1 182..238 CDD:214559 15/66 (23%)
ADAMTS_spacer1 349..468 CDD:461796 1/1 (100%)
TSP1_ADAMTS 510..567 CDD:465950
TSP1_ADAMTS 664..715 CDD:465950
TSP1_ADAMTS 720..768 CDD:465950
TSP1_ADAMTS 779..835 CDD:465950
PLAC 847..877 CDD:462560
stlNP_001097423.1 ZnMc_ADAMTS_like 331..543 CDD:239801
ADAMTS_CR_2 561..625 CDD:465496
TSP1 683..741 CDD:214559 15/66 (23%)
Blue background indicates that the domain is not in the aligned region.

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