DRSC/TRiP Functional Genomics Resources

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Protein Alignment loh and Adamts4

DIOPT Version :10

Sequence 1:NP_609406.2 Gene:loh / 34435 FlyBaseID:FBgn0032252 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_766433.2 Gene:Adamts4 / 240913 MGIID:1339949 Length:833 Species:Mus musculus


Alignment Length:308 Identity:89/308 - (28%)
Similarity:125/308 - (40%) Gaps:48/308 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 WDKWSDWSSCSRSCGGGVKYQVRKC---INRNLLTNNQLTSNACVGYFKRYQLCNDVPCDEQSP- 242
            |..|..|..|||:|||||::..|.|   :.||       ....|.|...|::.||...|...|. 
Mouse   519 WGPWGPWGDCSRTCGGGVQFSSRDCTRPVPRN-------GGKYCEGRRTRFRSCNTENCPHGSAL 576

  Fly   243 DFRASQCSAYND-----KEFHGHRYRWEPY---VKDDAECELNCMPFGMKSFATLNESVIDGTPC 299
            .||..||:|||.     |.|.| ...|.|.   |....:|:|.|....:..:..|...|.|||||
Mouse   577 TFREEQCAAYNHRTDLFKSFPG-PMDWVPRYTGVAPRDQCKLTCQARALGYYYVLEPRVADGTPC 640

  Fly   300 GHPAEYFRSQFWERAVCVDGACKAVQASGEIDGLYAHSGSVSCG--GLLCRPVTGIFTRNPLPEH 362
            .....         :|||.|.|........|.........:.||  |..|...:|.|.:.   .:
Mouse   641 SPDTS---------SVCVQGRCIHAGCDRIIGSKKKFDKCMVCGGDGSRCSKQSGSFKKF---RY 693

  Fly   363 AYIHVTTLPVGASNISITE-----LKNSINLLVLRTSNELAIFNGENTVSESGSYEAV-GAVFDY 421
            .|..|.|:|.||::|.:.:     ||:.  .|.|:.|:.....|||.|:..|.:...: |||  .
Mouse   694 GYSDVVTIPAGATHILVRQQGGSGLKSI--YLALKLSDGSYALNGEYTLMPSPTDVVLPGAV--S 754

  Fly   422 HRIDGAEDSNGVTEWITSIGPIRDSLQLMVFTK-SANNTGVKYEYMLP 468
            .|..||   ...:|.::..||:...|.|.|... :..|..::|.:.:|
Mouse   755 LRYSGA---TAASETLSGHGPLAQPLTLQVLVAGNPQNARLRYSFFVP 799

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lohNP_609406.2 TSP1 182..238 CDD:214559 20/58 (34%)
ADAMTS_spacer1 349..468 CDD:461796 33/125 (26%)
TSP1_ADAMTS 510..567 CDD:465950
TSP1_ADAMTS 664..715 CDD:465950
TSP1_ADAMTS 720..768 CDD:465950
TSP1_ADAMTS 779..835 CDD:465950
PLAC 847..877 CDD:462560
Adamts4NP_766433.2 Pep_M12B_propep 55..177 CDD:460254
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 180..204
Cysteine switch. /evidence=ECO:0000250 188..195
ZnMc_ADAMTS_like 214..421 CDD:239801
ADAMTS_CR_2 435..503 CDD:465496
TSP1 527..571 CDD:214559 17/50 (34%)
ADAMTS_CR_3 574..681 CDD:437068 33/116 (28%)
Spacer 682..833 34/128 (27%)
ADAMTS_spacer1 683..798 CDD:461796 33/124 (27%)
Blue background indicates that the domain is not in the aligned region.

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