DRSC/TRiP Functional Genomics Resources

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Protein Alignment loh and Adamtsl4

DIOPT Version :10

Sequence 1:NP_609406.2 Gene:loh / 34435 FlyBaseID:FBgn0032252 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_659148.2 Gene:Adamtsl4 / 229595 MGIID:2389008 Length:1036 Species:Mus musculus


Alignment Length:924 Identity:256/924 - (27%)
Similarity:378/924 - (40%) Gaps:208/924 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 DLSSPKQKPNNK--EEYLENETTSKISNKSDEKVLKSSTIISLNATNPSTS------TFKSVLET 125
            :|:|.|..|:.:  |....:..|.:......|.:.::|:..|...|...||      :|:..|..
Mouse   193 ELASEKHGPHMQPPEPRSHSAETPRSGTAQTEVLPRTSSAPSYTGTPAPTSSFGDSRSFQGSLGP 257

  Fly   126 TTLPSVTTKDLFESGNVATTRQTPKVEEVFSSPNPPQEATSSTSKKAKKKVYPYPRWDKWSD--- 187
            ...||..:   :.|...|..|..|..     ||.|    .|..|::..:...|:...|.|..   
Mouse   258 RMPPSPGS---WSSPQGAERRHPPPF-----SPVP----RSQQSRRHWRPPGPHRSPDGWLPLTR 310

  Fly   188 -----WSSCSRSCGGGVKYQVRKCINRNLLTNNQLTSNACVGYFKRYQLCNDVPCDEQSPDFRAS 247
                 ||..:.|                      :.:..|.|..::.:.|:..||..:.||.||.
Mouse   311 DSSPLWSIFAPS----------------------IPAPNCSGESEQMRACSQEPCPPEQPDPRAL 353

  Fly   248 QCSAYNDKEFHGHRYRWEPY--VKDDAECELNCMPFGMKSFATLNESVIDGTPCGHPAEYFRSQF 310
            ||:|::.:||.|..|:|||:  |:....|||||.|.|.:.:....|.|.|||.|         |.
Mouse   354 QCAAFDSQEFMGQLYQWEPFTEVQGSQRCELNCRPRGFRFYVRHTEKVQDGTLC---------QP 409

  Fly   311 WERAVCVDGACKAVQASGEIDGLYAHSGSVSCG--GLLCRPVTGIFT--RNPLPEHAYIHVTTLP 371
            ....:||.|.|.:....|.:.......|...||  |..||.|:|..|  ..||   .|..:..:|
Mouse   410 GSLDICVAGRCLSPGCDGVLGSGRRPDGCGVCGGDGSTCRLVSGNLTDRGGPL---GYQKILWIP 471

  Fly   372 VGASNISITELKNSINLLVLRTSNELAIFNGENTVSESGSYEAVGAVFDYHRIDGAEDSNGVTEW 436
            .|||::.|::|:.|.|.|.||.....:|.||...|...|||.|:|.||.|:|....|   |..|.
Mouse   472 AGASHLHISQLRPSSNYLALRGPGGRSIINGNWAVDPPGSYTAIGTVFQYNRPPREE---GKGES 533

  Fly   437 ITSIGPIRDSLQL-MVFTKSANNTGVKYEYML---PIVSESEENE-MSLESSDGLLRSGMEDTSS 496
            :::.||....:.: |:|.:  :|.||.|:|::   |.|.||...: .:|:....:||.  |....
Mouse   534 LSAEGPTTQPVDVYMIFQE--DNPGVFYQYVISSPPAVLESPSTKPPALQPQPEMLRG--EPLLP 594

  Fly   497 SS-----------------------------SSRAGRKRIFNWKVIGFSSCTKSCGGGTQTPIIR 532
            |:                             .|.||     .||.:|.|.|:.|||.|...||..
Mouse   595 SAPRPVRAPGTLQRQVRIPQVPPPTRVRTAMGSSAG-----YWKQVGHSECSASCGKGVWHPIFL 654

  Fly   533 CIRKNPLRYYSQRRCTHSVKPVLNENLLHCNTQPCPAYWRFDDWGECRCSSSGGLRRREVSCVQE 597
            ||.:.......::.|....:|..:..  .|:..|||.||...:|..|..|...|.:.|::.|.||
Mouse   655 CISRESGEELDEQSCAVGARPPASPE--PCHGPPCPPYWEAGEWTSCSRSCGPGTQHRQLLCRQE 717

  Fly   598 LASGLVIHVDKAACMEDQPPMQKQCECPKNRRRNLSR---------YRLSGP-SESS-------- 644
            ...|          ....||.:    |....|.|:::         :.:|.| |:.|        
Mouse   718 FGGG----------GSSVPPER----CGHLPRPNITQPCQLHLCGHWEISSPWSQCSVRCGRGQR 768

  Fly   645 --------SNSSQV-------------KRSKIDGSDATAIWLVSDWNQYCSVTCGSGVEYRTVFC 688
                    ||..:|             .|...|....|..|..|||:..||..||:|::.|.|.|
Mouse   769 SRQVRCVGSNGDEVDKQECASGPPPPPSREACDMGPCTTAWFYSDWSSKCSAECGTGIQRRAVVC 833

  Fly   689 DRS--------KAG--EQRCDPSTTPESRRPCEKPACELGD------WFTGPWSSCNGDCFDLTR 737
            .||        :||  ||.|     |...||.:..||.||.      |||||||.|:.:|...|:
Mouse   834 LRSGETLQGDPEAGSTEQGC-----PLRSRPPDMRACSLGPCERTWRWFTGPWSECSSECGSGTQ 893

  Fly   738 TREVLCIRSQL-----ITEHSECTPELKPQSVEKCSHEEVEYCAARWHYSDWSECTKPCGGGTQR 797
            .|:::|: |:|     :|..|.|:...:|.:::.|   :.:.|..:|..:.||.|::.|.||.|.
Mouse   894 HRDIICV-SKLGAEFNVTSPSNCSHLPRPPALQPC---QGQACEDKWFSTLWSPCSRSCQGGMQT 954

  Fly   798 RSVRCLEYDIKMNALRESTHCRYTNREPIYRNCNVQACAEVPKTEVTPVCADKFSNCQWASQAKL 862
            |.|:||..:..::: |...|.|.:.:.|    ||.|.|.:.|..:    |.|...:|....||:|
Mouse   955 REVQCLSGNQTLSS-RCPPHLRPSRKRP----CNSQPCNQRPDDQ----CKDSSPHCPLVVQARL 1010

  Fly   863 CSYDYYRDNCCFSC 876
            |.|.||...||.||
Mouse  1011 CVYPYYTTTCCRSC 1024

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lohNP_609406.2 TSP1 182..238 CDD:214559 9/63 (14%)
ADAMTS_spacer1 349..468 CDD:461796 42/124 (34%)
TSP1_ADAMTS 510..567 CDD:465950 16/56 (29%)
TSP1_ADAMTS 664..715 CDD:465950 22/60 (37%)
TSP1_ADAMTS 720..768 CDD:465950 18/52 (35%)
TSP1_ADAMTS 779..835 CDD:465950 19/55 (35%)
PLAC 847..877 CDD:462560 14/30 (47%)
Adamtsl4NP_659148.2 TSP1 46..>70 CDD:214559
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 73..149
PHA03247 <161..360 CDD:223021 43/200 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 163..308 28/126 (22%)
ADAMTS_CR_3 354..448 CDD:437068 34/102 (33%)
ADAMTS_spacer1 450..563 CDD:461796 42/120 (35%)
TSP1_ADAMTS 638..687 CDD:465950 13/50 (26%)
TSP1_ADAMTS 691..747 CDD:465950 15/69 (22%)
TSP1_ADAMTS 755..805 CDD:465950 8/49 (16%)
TSP1_ADAMTS 809..870 CDD:465950 26/65 (40%)
TSP1_ADAMTS 876..932 CDD:465950 19/59 (32%)
TSP1_ADAMTS 936..987 CDD:465950 19/55 (35%)
PLAC 995..1024 CDD:462560 12/28 (43%)
Blue background indicates that the domain is not in the aligned region.

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