DRSC/TRiP Functional Genomics Resources

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Protein Alignment loh and adamtsl5

DIOPT Version :10

Sequence 1:NP_609406.2 Gene:loh / 34435 FlyBaseID:FBgn0032252 Length:880 Species:Drosophila melanogaster
Sequence 2:XP_005166548.1 Gene:adamtsl5 / 101886605 ZFINID:ZDB-GENE-161017-76 Length:538 Species:Danio rerio


Alignment Length:563 Identity:129/563 - (22%)
Similarity:209/563 - (37%) Gaps:132/563 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 SSPNPPQEATSSTSKKAKKKVYPYPRWDKWSDWSSCSRSCGGGVKYQVRKCINRNLLTNNQLTSN 220
            |.|:..:........:.:.:::....|..|..||.||||||||...:.|.|:.|||:      ..
Zfish    29 SPPSSRRVELGGEGLQMRSQMHFMNEWASWGGWSVCSRSCGGGASVRTRTCMTRNLV------GG 87

  Fly   221 ACVGYFKRYQLCNDVPCDEQSPDFRASQCSAYNDKEF-HGHRYRWEPYVKDDAECELNCMPFGMK 284
            .|.|..::|::||...|...|.|||..||.|:||:.. .|..:.|..:......|||:|:..|..
Zfish    88 PCPGDTRQYKICNSKECPADSMDFRELQCKAFNDRPLVAGSSFHWTTFHGGSDPCELSCLAIGHN 152

  Fly   285 SFATLNESVIDGTPCGHPAEYFRSQFWERAVCVDGACKAVQASGEIDGLYAHSGSVSCGG----- 344
            .:..... |:|||||         |..:..|||:|.|..................:.|||     
Zfish   153 FYYNFGR-VLDGTPC---------QSDQGTVCVNGKCLKPGCDLIFGSQQQEDACMVCGGHNSTC 207

  Fly   345 LLCRPV-------TGIFTRNPLPEHAYIHVTTLPVGASNISITELKNSINLLVLRTSNELAIFNG 402
            |..|.|       .|:|        .|..||.:|.||::|.:|:  ||.|.|.|:..:...:.||
Zfish   208 LHHRSVYQSNGQNNGLF--------GYSEVTMIPAGATHIRVTD--NSRNYLALQNGHSQFVING 262

  Fly   403 ENTVSESGSYEAVGAVFDYHRIDGAEDSNGVTEWITSIGPIRDSLQLMVFTKSANNTGVKYEYML 467
            ...::..|.|...|....|.|.....:|..|:      ||.::.|.:||.: :...:|::|||.|
Zfish   263 NWKINVPGEYSVAGTKLQYRRSADTWESFEVS------GPTQEDLHIMVLS-TDKKSGIEYEYWL 320

  Fly   468 PIVSESEENEMSLESSDGLLR--------------SGMEDTSSSSSSRAGRKRIFNWKVIGFSSC 518
            |      .:..:|......||              :....|::::::.....|.|.|        
Zfish   321 P------PDRYALYHGRSQLRQTHHTANHLPFEPPTTRTTTTTTTTTAQPTTRAFFW-------- 371

  Fly   519 TKSCGGGTQTPIIRCIRKNPLRYYSQRRCTHSVKPVLNENLLHCNTQPCPAYWRFDDWGECRCSS 583
                |...|.|.....::.|:....:.....:..|.::.. .||              |:||...
Zfish   372 ----GPAAQWPFQPPYQQQPVPRLERDENRRNRLPEIHRR-GHC--------------GKCRRVR 417

  Fly   584 SGGLRRRE---------VSCVQELASG-------LVIHVDKAACMEDQPPM---QKQCECPK--- 626
            ..|.|:|:         |..::::..|       .:||..:.....:....   ..:|:||.   
Zfish   418 GKGERQRQYCQKDFVFRVKVLEKVYLGEETRYDVQIIHTYRNRYRVEHREFLWAPNKCDCPLLEE 482

  Fly   627 ------------NRRRNLSRYRLSGPSESSSNSSQVKRSKIDG 657
                        |..|.|:|..:     ...:.:|..|::.||
Zfish   483 GHQYVLMLRRHINYERTLNRILI-----EEDSYAQPYRAREDG 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lohNP_609406.2 TSP1 182..238 CDD:214559 22/55 (40%)
ADAMTS_spacer1 349..468 CDD:461796 34/125 (27%)
TSP1_ADAMTS 510..567 CDD:465950 8/56 (14%)
TSP1_ADAMTS 664..715 CDD:465950
TSP1_ADAMTS 720..768 CDD:465950
TSP1_ADAMTS 779..835 CDD:465950
PLAC 847..877 CDD:462560
adamtsl5XP_005166548.1 TSP1 55..105 CDD:214559 22/55 (40%)
ADAMTS_CR_3 109..207 CDD:437068 30/107 (28%)
ADAMTS_spacer1 225..321 CDD:461796 31/104 (30%)
NTR 426..519 CDD:396359 13/97 (13%)
Blue background indicates that the domain is not in the aligned region.

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