DRSC/TRiP Functional Genomics Resources

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Protein Alignment loh and adamts17

DIOPT Version :10

Sequence 1:NP_609406.2 Gene:loh / 34435 FlyBaseID:FBgn0032252 Length:880 Species:Drosophila melanogaster
Sequence 2:XP_073764157.1 Gene:adamts17 / 101884120 ZFINID:ZDB-GENE-121030-7 Length:1134 Species:Danio rerio


Alignment Length:771 Identity:192/771 - (24%)
Similarity:291/771 - (37%) Gaps:204/771 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 NPPQEATSSTSKK---AKKKV--YPYPR-----WDKWSDWSSCSRSCGGGVKYQVRKCINRNLLT 213
            :||.:.|...:.|   |.:.|  .|.|:     |..||.||.|||:||.|.:::.|||.|.....
Zfish   503 DPPLDGTECGADKWCRAGECVSKTPIPQHVDGDWSPWSTWSMCSRTCGTGARFRQRKCDNPPPGP 567

  Fly   214 NNQLTSNACVGYFKRYQLCNDVPCDEQSPDFRASQCSAYNDKEFHGHRYRWEPYVKDDAECELNC 278
            ..:....|.|    .:::|...||.:..|.||..||.:: :::.......|...:.|:..|.|.|
Zfish   568 GGKYCQKASV----EHKVCEGPPCTKGLPTFRDQQCQSH-ERQASKKSQMWTAVIDDEKPCALYC 627

  Fly   279 MPFGMKSFATLNESVIDGTPCGHPAEYFRSQFWERAVCVDGACKAVQASGEIDGLYAHSGSVS-C 342
            .|.|..|...:.|.|:||||||.         :|..:||:|.|:.:..    ||:...|.... |
Zfish   628 TPVGSDSPVLVAERVLDGTPCGP---------YESDLCVNGKCQKIGC----DGIIGSSAKEDRC 679

  Fly   343 G-----GLLCRPVTGIF--TRNPLPE---------------------HAYIHVTTLPVGASNISI 379
            |     |..||.:.|.|  ::..:|.                     ..||....:||||..|.:
Zfish   680 GVCNGDGKSCRIIKGDFNHSKGMVPHSLCKKVSTCVMSKPRAVLKCFSCYIEAAVIPVGARRIKV 744

  Fly   380 TELKNSINLLVLRTSNELAIFNGENTVSESGSYEAVGAVFDYHRIDGAEDSNGVTEWITSIGPIR 444
            .|.|.|.:.|.|:.|::.:| |.:..:...|.:|..|....|.|       .|:.|.:::.||.:
Zfish   745 VEDKPSHSFLALKDSSKRSI-NNDWKIELPGEFELAGTTVRYVR-------RGLWEKMSAKGPTK 801

  Fly   445 DSLQLMVFTKSANNTGVKYEYMLPIVSESEENEMSLESSDGLLRSGMEDTSSSSSSRAGRKRIFN 509
            ..|.|||........|:.|||.:.: :.|:||     ||| |::.              .:.::.
Zfish   802 TPLHLMVLLFHDQTYGIHYEYTVAL-NHSQEN-----SSD-LVKE--------------PEHMYL 845

  Fly   510 WKVIGFSSCTKSCGGGTQTPIIRCIR--KNPLRYYSQRRCTHSVKPVLNENLLHCNTQPCPAYWR 572
            |....:..|:..||||.:..::.|:|  ...:...:...|....||  :..:..||..||...|.
Zfish   846 WTHSSWEDCSVHCGGGERRTVVSCMRIINKTMTPVNDSSCQVENKP--SPQIRQCNIHPCQYRWV 908

  Fly   573 FDDWGECRCSSSGGLRRREVSCVQELASGLVIHVDKAACMEDQPPMQKQCECPKNRRRNLSRYRL 637
            ..||.:|..:...||::|||.|:.:|.:|..|......|:..:|...:.||              
Zfish   909 TGDWTQCSLTCGKGLQQREVGCIYQLQNGTYIPTRDLYCLSSKPASVQHCE-------------- 959

  Fly   638 SGPSESSSNSSQVKRSKIDGSDATAIWLVSDWNQYCSVTCGSGVEYRTVFCDRSKAGEQRCDPST 702
                               |.....:|..|:|:| ||..||.|...|||.|.....   .|||.:
Zfish   960 -------------------GRHCLTVWEASEWSQ-CSSECGHGSRRRTVTCTNPHG---LCDPVS 1001

  Fly   703 TPESRRPCEKPACELGDWFTGPWSSCNGDCFDLTRTREVLCIRSQLITEHSECTPELKPQSVEKC 767
                 ||.|..|||                                  :||:|            
Zfish  1002 -----RPAEVEACE----------------------------------DHSKC------------ 1015

  Fly   768 SHEEVEYCAARWHYSDWSECTKPCGGGTQRRSVRCLEYDIKMNALRESTHCRYTNREPIYRNCNV 832
                     ..|...:||:|:..||.|.|.|.|:|:.   :::. |..:.|....:...||.|:.
Zfish  1016 ---------YEWKTGEWSKCSSSCGRGLQSRVVQCMH---RVSG-RHGSDCPAVLKPATYRQCHQ 1067

  Fly   833 QAC---AEVPKTEVTPVCADKFSNC---QWASQAK------LCSYDYYRDNCCFSC 876
            ..|   ..: .|..:|..|.....|   |||...|      ||....:...||.:|
Zfish  1068 STCNARGNI-NTITSPRLAALTYKCVGDQWAVYCKVIREKNLCQDMRWYQRCCQTC 1122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lohNP_609406.2 TSP1 182..238 CDD:214559 19/55 (35%)
ADAMTS_spacer1 349..468 CDD:461796 35/141 (25%)
TSP1_ADAMTS 510..567 CDD:465950 13/58 (22%)
TSP1_ADAMTS 664..715 CDD:465950 19/50 (38%)
TSP1_ADAMTS 720..768 CDD:465950 3/47 (6%)
TSP1_ADAMTS 779..835 CDD:465950 16/55 (29%)
PLAC 847..877 CDD:462560 11/39 (28%)
adamts17XP_073764157.1 None

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