DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment loh and Adamts9

DIOPT Version :9

Sequence 1:NP_609406.2 Gene:loh / 34435 FlyBaseID:FBgn0032252 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_780523.3 Gene:Adamts9 / 101401 MGIID:1916320 Length:1931 Species:Mus musculus


Alignment Length:766 Identity:189/766 - (24%)
Similarity:287/766 - (37%) Gaps:186/766 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 WDKWSDWSSCSRSCGGGVKYQVRKCINRNLLTNNQLTSNACVGYFKRYQLCNDVPCDEQSPDFRA 246
            |..||.:.:|||:||||:|..:|:| ||....|.   ...|||...:::.||..||.:|..|||.
Mouse   591 WGGWSHFGTCSRTCGGGIKTAIREC-NRPEPKNG---GKYCVGRRMKFKSCNTEPCMKQKRDFRE 651

  Fly   247 SQCSAYNDKEFHGH----RYRWEP-----YVKDDAECELNCMPFGMKSFATLNESVIDGTPCGHP 302
            .||:.::.|.|:.:    ..||.|     .:||  .|:|.|...|..::..|.:.||||||||..
Mouse   652 EQCAHFDGKHFNINGLLPSVRWVPKYSGILMKD--RCKLFCRVAGNTAYYQLRDRVIDGTPCGQD 714

  Fly   303 AEYFRSQFWERAVCVDGACKAVQASGEIDGLYAHSGSVSCGG--LLCRPVTGIFTRNPLPEHAYI 365
            .         ..:||.|.|:.......::..........|||  ..|:.|.|.|.   ...:.|.
Mouse   715 T---------NDICVQGLCRQAGCDHILNSKARKDKCGICGGDNSSCKTVAGTFN---TVHYGYN 767

  Fly   366 HVTTLPVGASNISITE-----LKNSINLLVLRTSNELAIFNGENTVSESGSYEAVG-AVFDYHRI 424
            .|..:|.||::|.:.:     .....|.|.|..|....:.||:..||.|.....|| ||.:|   
Mouse   768 TVVRIPAGATSIDVRQHSFSGKSEDDNYLALSNSKGEFLLNGDFVVSMSKREVRVGSAVIEY--- 829

  Fly   425 DGAEDSNGVTEWITSIGPIRDSLQLMVFT-KSANNTGVKYEYMLPI------------------- 469
               ..|:.|.|.:.....|.:.|.|.|.: ....|..|:|.:.:||                   
Mouse   830 ---SGSDNVVERLNCTDRIEEELLLQVLSVGKLYNPDVRYSFNIPIEDKPQQFYWNSHGPWQACS 891

  Fly   470 -------------VSESEENEMSLESSDGLLRSGMEDTSSSSSSRAGRKRIFNWKVIGFSSCTKS 521
                         ..||::..:|.:..|.|.:.|      ..:...|......|.|...|.|:..
Mouse   892 KPCQGERRRKLVCTRESDQLTVSDQRCDRLPQPG------PVTEACGTDCDLRWHVASKSECSAQ 950

  Fly   522 CGGGTQTPIIRCIRKNPLRYYSQR----RCTHSVKPVLNENLLHCNTQPCPAYWRFDDWGECRCS 582
            ||.|.:|..|.|.:.:.:...:::    .|:...:|   .|...|:.:.....||:..|.||..|
Mouse   951 CGLGYRTLDIHCAKYSRMDGKTEKVDDSFCSSQPRP---SNQEKCSGECSTGGWRYSAWTECSRS 1012

  Fly   583 SSGGLRRREVSCVQELASGLVIHVDKAACMEDQPPMQKQC---ECPKNRRRNLSRYRLSGPSESS 644
            ..||.:||...||......|    |.:.|...:..:.:.|   .||.                  
Mouse  1013 CDGGTQRRRAICVNTRNDVL----DDSKCTHQEKVVVQSCNEFSCPH------------------ 1055

  Fly   645 SNSSQVKRSKIDGSDATAIWLVSDWNQYCSVTCGSGVEYRTVFCD--RSKAGEQRCDPSTTPESR 707
                               |...||:: |.||||.|.::|.|:|.  ..:..::.|||...||..
Mouse  1056 -------------------WKTGDWSE-CLVTCGKGHKHRQVWCQFGEDRLSDRMCDPEAKPEPM 1100

  Fly   708 RPCEKPACELGDWFTGPWSSCNGDCFDLTRTREVLCIRS--QLITEHSECTPELKPQSVEKCSHE 770
            :.|::|.|  ..|..|||..|:..|....:.|.|.||..  ..:.:.::|....:|...:.|   
Mouse  1101 QTCQQPEC--AAWQAGPWGQCSVTCGQGYQLRAVKCIMGTYMSVVDDNDCNAATRPTDTQDC--- 1160

  Fly   771 EVEYC-----------------AARWHYSDWSECTKPCGGGTQRRSVRCLEYDIKMNALRESTHC 818
            |:..|                 ..:|.:..|:.|:..||.||:.|.|.|.:.|..:         
Mouse  1161 ELASCHPSILALEPRRNAQSIPRTQWRFGSWTPCSATCGKGTRMRYVSCRDEDGSV--------- 1216

  Fly   819 RYTNREPIYRNCNVQACAEVPK------TEVTPVCADKFSNCQWASQAKLC 863
                       .:..|||.:||      ..||| |. ::....|:|.:..|
Mouse  1217 -----------ADESACATLPKPVAKEECSVTP-CG-QWKALDWSSCSVTC 1254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lohNP_609406.2 TSP1 182..238 CDD:214559 22/55 (40%)
ADAM_spacer1 348..468 CDD:283607 33/126 (26%)
TSP1 667..716 CDD:214559 18/50 (36%)
TSP1 779..835 CDD:214559 11/55 (20%)
PLAC 847..877 CDD:285849 4/17 (24%)
Adamts9NP_780523.3 Pep_M12B_propep 49..207 CDD:334593
ZnMc_ADAMTS_like 293..496 CDD:239801
TSP1 591..642 CDD:214559 21/54 (39%)
ADAM_spacer1 753..871 CDD:310520 33/126 (26%)
TSP1 1001..1054 CDD:214559 16/56 (29%)
TSP1 1055..1108 CDD:214559 19/90 (21%)
TSP1 1114..1166 CDD:214559 13/54 (24%)
TSP1 1186..1239 CDD:214559 19/73 (26%)
TSP1 1239..1296 CDD:214559 4/17 (24%)
TSP1 1328..1380 CDD:214559
TSP1 1382..1436 CDD:214559
TSP1 1441..1483 CDD:214559
TSP1 1500..1551 CDD:214559
TSP1 1560..1609 CDD:214559
TSP1 1611..>1636 CDD:214559
GON 1734..1930 CDD:337156
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 49 1.000 Domainoid score I11733
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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