DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment loh and adamts9

DIOPT Version :9

Sequence 1:NP_609406.2 Gene:loh / 34435 FlyBaseID:FBgn0032252 Length:880 Species:Drosophila melanogaster
Sequence 2:NP_001244125.1 Gene:adamts9 / 100333407 ZFINID:ZDB-GENE-070814-6 Length:1643 Species:Danio rerio


Alignment Length:782 Identity:190/782 - (24%)
Similarity:296/782 - (37%) Gaps:200/782 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 WDKWSDWSSCSRSCGGGVKYQVRKCINRNLLTNNQLTSNACVGYFKRYQLCNDVPCDEQSPDFRA 246
            |..||.:.:|||:||||:|..||:| ||.:..|.   ...|||...:::.||..||.:|..|||.
Zfish   730 WGVWSPFGTCSRTCGGGIKIAVREC-NRPVPRNG---GKYCVGRRMKFRSCNSEPCSKQKKDFRE 790

  Fly   247 SQCSAYNDKEFHGH----RYRWEP-----YVKDDAECELNCMPFGMKSFATLNESVIDGTPCGHP 302
            .||::::.:.|:.:    ..||.|     .:||  .|:|.|...|..::..|.:.|.|||.||..
Zfish   791 EQCASFDGRHFNINGLPPNVRWVPKYSGILMKD--RCKLFCRVAGSTAYYQLRDRVTDGTQCGPD 853

  Fly   303 AEYFRSQFWERAVCVDGACKAVQASGEIDGLYAHSGSVSCGG--LLCRPVTGIFTRNPLPEHAYI 365
            .         ..:||.|.|:.......::..........|||  ..|:||.|.|.   :..:.|.
Zfish   854 T---------NDICVQGLCRQAGCDHVLNSKARRDKCGVCGGDNSSCKPVAGTFN---IVHYGYN 906

  Fly   366 HVTTLPVGASNISITELKNS-----INLLVLRTSNELAIFNGENTVSESGSYEAVG-AVFDYHRI 424
            .|..:|.||:||.:.:...|     .|.|.|..|....:.||:..||.......|| ||.:|   
Zfish   907 VVVRIPSGATNIDVRQHSYSGKAEDDNYLALSNSRGEYLLNGDFVVSMFKREVRVGNAVIEY--- 968

  Fly   425 DGAEDSNGVTEWITSIGPIRDSLQLMVFT-KSANNTGVKYEYMLPIVS----------------- 471
               ..|:.|.|.|.....|.:.:.:.|.: .:..|..|:|.|.:||..                 
Zfish   969 ---SGSDHVVERINCTDRIEEEIIIQVLSVGNLYNPDVRYSYNIPIEDKPQHFFWDAYGPWQDCS 1030

  Fly   472 ---------------ESEENEMSLESSDGLLRSGMEDTSSSSSSRAGRKRIFNWKVIGFSSCTKS 521
                           ||:...:|.:...||.:......|.::....|      |.:...|.||.:
Zfish  1031 LLCQGERKKKILCNRESDRVVVSDQRCHGLPKPAAITESCNTDCELG------WHIARKSECTAA 1089

  Fly   522 CGGGTQTPIIRCIRKNPL----RYYSQRRCTHSVKPVLNENLLH--CNTQPCPAYWRFDDWGECR 580
            ||.|.::..|.|.:::.|    :...:|.|:...|| .::.:.|  ||    |..|.:..|.||.
Zfish  1090 CGVGYRSLDIYCTKQSRLDGKTQKVDERYCSSQHKP-NDKEVCHGDCN----PGGWEYSSWSECS 1149

  Fly   581 CSSSGGLRRREVSCVQELASGLVIHVDKAACMEDQPPMQKQCE---CPKNRRRNLSRYRLSGPSE 642
            .|..||.|||...|.:.....     |.:.|...:....:.|.   ||:                
Zfish  1150 RSCGGGTRRRNAICGKSDERD-----DDSKCNPQEKLTAQPCNEFLCPQ---------------- 1193

  Fly   643 SSSNSSQVKRSKIDGSDATAIWLVSDWNQYCSVTCGSGVEYRTVFCDRSKAGEQR-----CDPST 702
                                 |...||:: |.||||.|.::|..:|   :.||:|     || |:
Zfish  1194 ---------------------WKTGDWSE-CLVTCGKGYKHRQTWC---QFGEERLDVRFCD-SS 1232

  Fly   703 TPESRRPCEKPACELGDWFTGPWSSCNGDCFDLTRTREVLCIRSQL--ITEHSECTPELKPQSVE 765
            .|||.:.|::..|  ..|..|||..|...|....:.|.|.|:....  :.:.:||....:|...:
Zfish  1233 KPESVQACQQQEC--ASWQVGPWGQCTTTCGPGYQMRAVKCVVGSYGSVMDDTECNAATRPTDTQ 1295

  Fly   766 KCSHEEVEYC------------------AARWHYSDWSECTKPCGGGTQRRSVRCLEYDIKMNAL 812
            .|.   :..|                  ..:|.:..|::|:..||.||:.|.|.|.:   :...:
Zfish  1296 DCG---LSQCPVTHPVAPEPKVMPHPGHKTQWRFGSWTQCSATCGKGTRMRYVSCRD---QQGGV 1354

  Fly   813 RESTHCRYTNREPIYRNCNVQACAEVPKTEVTPVCADKFSNCQWASQAKLCSYDYYRDNCCFSCT 877
            .|.:.|.:..:.|....|::.||.:             :...:|.:             |..||.
Zfish  1355 AEESACAHLPKPPASEVCSIVACGQ-------------WKVLEWTA-------------CSVSCG 1393

  Fly   878 GG 879
            .|
Zfish  1394 QG 1395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lohNP_609406.2 TSP1 182..238 CDD:214559 23/55 (42%)
ADAM_spacer1 348..468 CDD:283607 35/126 (28%)
TSP1 667..716 CDD:214559 20/53 (38%)
TSP1 779..835 CDD:214559 14/55 (25%)
PLAC 847..877 CDD:285849 3/29 (10%)
adamts9NP_001244125.1 Pep_M12B_propep 35..165 CDD:279848
Pep_M12B_propep 217..347 CDD:279848
Reprolysin 429..638 CDD:279729
ZnMc_ADAMTS_like 429..635 CDD:239801
TSP1 730..782 CDD:214559 23/55 (42%)
ADAM_spacer1 892..1010 CDD:283607 35/126 (28%)
TSP1 1140..1192 CDD:214559 14/56 (25%)
TSP1 1194..1245 CDD:214559 21/55 (38%)
TSP1 1248..1303 CDD:214559 13/57 (23%)
TSP1 1324..>1352 CDD:214559 10/30 (33%)
TSP1 1377..1434 CDD:214559 6/45 (13%)
TSP1 1472..1524 CDD:214559
TSP1 1526..1580 CDD:214559
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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