DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nse4 and AT1G51130

DIOPT Version :9

Sequence 1:NP_001162938.1 Gene:Nse4 / 34434 FlyBaseID:FBgn0032251 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_175525.1 Gene:AT1G51130 / 841536 AraportID:AT1G51130 Length:403 Species:Arabidopsis thaliana


Alignment Length:291 Identity:69/291 - (23%)
Similarity:121/291 - (41%) Gaps:66/291 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 QMDDQ---DARILR-----LQNLIEKNIEIEQQIENNTIGESITAIEEIIQTANDISKGHEDRRT 65
            |.::|   |.||||     |||.|....:...:|:::.....|.|:|.:.|   .:.|..|  :.
plant    50 QEEEQGISDRRILRSKYLSLQNEINDCKDDLMKIDSDKFSRIINAVENLHQ---QVRKPRE--QI 109

  Fly    66 NSTELVLD------TELLRRNFEVVGKAIQHNTNV-----------TDRMVATAI--NDLVFKES 111
            ...|.:||      :.:..::...|..|...|..:           ||.....::  .||.|   
plant   110 ADAEALLDIANTLMSSVKSQSAHGVSPAEFVNALISGFGQGSLGIDTDETAQVSLKWKDLGF--- 171

  Fly   112 EEDWDALCS-LAIQFGRPLFTNDSMLPFIDVTPKVVVQKQRAPRKTKSQVDE-KRPEKSD--QLE 172
                 |:|| :.:..|     ..:||..:|...|   |::|||.:.:::..| .||::.|  |.|
plant   172 -----AVCSTVLVSCG-----CSTMLGPMDTELK---QRKRAPNRKRTKPGEGVRPDEVDDSQSE 223

  Fly   173 RKDEGAASVTHMLKQIRQIYRDGNQEPIPYFKLICNPNNFMDTVQNALQLSFLVKENYISIENGE 237
            .|.:...::|.|...:      |.::.:....|:.|..:|..||:|...||||.|:..:.|...:
plant   224 EKTDTDKNMTIMFNIL------GKKKRVQLENLVLNRRSFAQTVENLFALSFLAKDGRVEIIVDK 282

  Fly   238 DGLPLVRVVNSKSVEGNAP-SQAICSIDVTF 267
            .|       :..::..||| :..:.|.:|.:
plant   283 SG-------SHFAMPRNAPDANVVMSGEVIY 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nse4NP_001162938.1 Nse4_C 200..282 CDD:285900 18/69 (26%)
AT1G51130NP_175525.1 Nse4_C 244..331 CDD:400887 18/70 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5125
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D935469at2759
OrthoFinder 1 1.000 - - FOG0002403
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_102377
Panther 1 1.100 - - LDO PTHR16140
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.870

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