DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nse4 and AT3G20760

DIOPT Version :10

Sequence 1:NP_609405.2 Gene:Nse4 / 34434 FlyBaseID:FBgn0032251 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_188712.4 Gene:AT3G20760 / 821624 AraportID:AT3G20760 Length:383 Species:Arabidopsis thaliana


Alignment Length:311 Identity:65/311 - (20%)
Similarity:116/311 - (37%) Gaps:75/311 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DSSESQSQMDDQDARILRLQNLIEKNIEIEQQIENNTIGESITAIEEIIQTANDISKGHEDRRTN 66
            |:.:..:::|..     :..::|.:...:.|::....  |.|...|.::...|.:....:.:..:
plant    78 DAKDDLTKIDSN-----KFNSIINEVENLHQKVRKPR--EQIADAEALLDLTNSVVSSVKSQSAH 135

  Fly    67 STELVLDTELLRRNFEVVGKA-----IQHNTNVTDRMVATAINDLVFKESEEDWDALCSLAI--- 123
            ..  |...|.:.......||.     ...||.|:.:.     .||.|        .:||..:   
plant   136 GG--VSPAEFVNALINGFGKTSLRIDADENTQVSMKW-----KDLGF--------TVCSTVLVSC 185

  Fly   124 ----QFGRPLFTNDSMLPFIDVTPKVVVQKQRAPR-----KTKSQVDEKRPEKSD--QLERKDEG 177
                ..| |:::.               .|||..|     :||.....| ||:.|  :.|:|.:.
plant   186 GCTTMMG-PMYSE---------------MKQRKSRVGNRKRTKPGAGVK-PEEVDDTEAEKKSDT 233

  Fly   178 AASVTHMLKQIRQIYRDGNQEPIPYFKLICNPNNFMDTVQNALQLSFLVKENYISIENGEDGLPL 242
            ..::..|...:|:..|      :....|:.|..:|..|.:|...||||||:..:.|....:|   
plant   234 DNNMAVMFNILRKNKR------VKIENLVLNRKSFAQTAENMFALSFLVKDGRVEITVDNNG--- 289

  Fly   243 VRVVNSKSVE-GNAP-SQAICSIDVTFCEKMVK-HYNLHEPMLKRLPVSEK 290
                 |..|| .||| :..:.|.:|.:...::: .|...|||.|.:.|.|:
plant   290 -----SHFVEPRNAPAANLVLSGEVAYNHFVLRFDYKDWEPMSKMVAVGEE 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nse4NP_609405.2 Nse4_C 199..282 CDD:462585 24/85 (28%)
AT3G20760NP_188712.4 Nse4_C 249..337 CDD:462585 29/101 (29%)

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