DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nse4 and Eid3

DIOPT Version :9

Sequence 1:NP_001162938.1 Gene:Nse4 / 34434 FlyBaseID:FBgn0032251 Length:290 Species:Drosophila melanogaster
Sequence 2:NP_079775.2 Gene:Eid3 / 66341 MGIID:1913591 Length:375 Species:Mus musculus


Alignment Length:325 Identity:65/325 - (20%)
Similarity:124/325 - (38%) Gaps:78/325 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 MDDQDARILRLQNLIEKNIEIEQQIENNTIGESITAIEEIIQTANDISKGHEDRRTNSTE---LV 71
            :|.:..|.:|.|  ..:.|...||...:.:..:...:.|.::.||.:..|....|..:.:   ||
Mouse    75 VDREKCRKIRRQ--YRQLIYTVQQNREDIVNTASDTLSEALEEANVLFDGVSRTREAALDAQFLV 137

  Fly    72 LDTELLRRNFEVVGKAIQHNTNVTDRMVATAINDLVFKESEEDWDALCSLAIQFGRPLFTNDSML 136
            |.::|.:.      ||.|.||::      ...|.:.|          |.|.:.|....:..:...
Mouse   138 LASDLGKE------KAKQLNTDM------NFFNPIAF----------CDLLLLFVGFNWVEEECK 180

  Fly   137 PFIDVTPKVVV---------------------------QKQRAPRK---------TKSQVDEKRP 165
            .|.|....:|:                           :.:|:.||         .|.:.....|
Mouse   181 EFSDCDDSIVLSFWGMLHEEATSWMLQAETFHFIFGSFKAERSARKPRLGCHKRACKMEGSGDMP 245

  Fly   166 EKSDQL------ERKDEGAASVTHMLKQIRQIYRDGNQEPIPYFKLICNPNNFMDTVQNALQLSF 224
            .|..:|      |..::....:..:|:...|.|.|   .|:.||:.:.:||:|..||:|...:||
Mouse   246 TKLRRLDVHANQETTEKEVERILGLLQTYFQKYPD---TPVSYFEFVIDPNSFSRTVENIFYVSF 307

  Fly   225 LVKENYISIENGEDGLPLVRVVNSKSVEGNAPSQAIC------SIDVTFCEKMVKHYNLHEPMLK 283
            ::::.:..|...:|.||::...|...|:..:.|.:.|      |:.:...:.:|..:.:.|.|:|
Mouse   308 IIRDGFARIRLDQDRLPILEPTNVSQVDDESDSYSYCRKQGVISLSLQDWKNIVSTFEISEAMIK 372

  Fly   284  283
            Mouse   373  372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nse4NP_001162938.1 Nse4_C 200..282 CDD:285900 21/87 (24%)
Eid3NP_079775.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 30..68
Nse4-Nse3_bdg 132..178 CDD:292054 14/67 (21%)
Nse4_C 283..371 CDD:285900 21/87 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831621
Domainoid 1 1.000 53 1.000 Domainoid score I11304
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002403
OrthoInspector 1 1.000 - - otm43445
orthoMCL 1 0.900 - - OOG6_102377
Panther 1 1.100 - - O PTHR16140
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R844
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.870

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