DRSC/TRiP Functional Genomics Resources

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Protein Alignment STUB1 and TOM71

DIOPT Version :9

Sequence 1:NP_477441.1 Gene:STUB1 / 34433 FlyBaseID:FBgn0027052 Length:289 Species:Drosophila melanogaster
Sequence 2:NP_011985.1 Gene:TOM71 / 856517 SGDID:S000001159 Length:639 Species:Saccharomyces cerevisiae


Alignment Length:202 Identity:45/202 - (22%)
Similarity:81/202 - (40%) Gaps:20/202 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LQLKEQGNCLFAARKYDDAINCYSKAIIKNPTNATYFTNRALCNLKLKRWELCCQDSRRALDIDG 79
            :|||.:||..|.|:.:::||..|..||..:|....:::|.:.|.:.....|...:.:.:||:|..
Yeast   128 VQLKNRGNHFFTAKNFNEAIKYYQYAIELDPNEPVFYSNISACYISTGDLEKVIEFTTKALEIKP 192

  Fly    80 NLLKGHFFLGQGLMEIDNFDEAIKHLQRAYDLSKEQKQNFGDDITLQLRLAR---KKRWNVMEEK 141
            :..|...........:.||.:|:      :|||........|..:::..|.|   |:...|:.|.
Yeast   193 DHSKALLRRASANESLGNFTDAM------FDLSVLSLNGDFDGASIEPMLERNLNKQAMKVLNEN 251

  Fly   142 RIQQE----------IELQSYLNGLIKGDMESRLANLKLNGNVHDEQLKDKQQEIEQECDDHIKE 196
            ..:.|          ..|.|:. |:....:|....|...|.:.....|.|..|.:....|:....
Yeast   252 LSKDEGRGSQVLPSNTSLASFF-GIFDSHLEVSSVNTSSNYDTAYALLSDALQRLYSATDEGYLV 315

  Fly   197 LNNIFSK 203
            .|::.:|
Yeast   316 ANDLLTK 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
STUB1NP_477441.1 TPR_11 17..78 CDD:290150 17/60 (28%)
TPR 17..47 CDD:197478 12/29 (41%)
TPR repeat 17..42 CDD:276809 10/24 (42%)
TPR repeat 47..77 CDD:276809 5/29 (17%)
TPR repeat 82..110 CDD:276809 4/27 (15%)
U-box 213..285 CDD:252675
TOM71NP_011985.1 3a0801s09 9..636 CDD:273380 45/202 (22%)
TPR repeat 127..155 CDD:276809 11/26 (42%)
TPR repeat 160..190 CDD:276809 5/29 (17%)
TPR repeat 195..218 CDD:276809 4/28 (14%)
TPR repeat 345..373 CDD:276809
TPR repeat 378..406 CDD:276809
TPR repeat 411..441 CDD:276809
TPR repeat 446..471 CDD:276809
TPR repeat 480..508 CDD:276809
TPR repeat 513..559 CDD:276809
TPR repeat 564..588 CDD:276809
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345408
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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