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Protein Alignment STUB1 and Stub1

DIOPT Version :9

Sequence 1:	NP_477441.1	Gene:	STUB1 / 34433	FlyBaseID:	FBgn0027052	Length:	289	Species:	Drosophila melanogaster
Sequence 2:	NP_062693.1	Gene:	Stub1 / 56424	MGIID:	1891731	Length:	304	Species:	Mus musculus

Alignment Length:	276	Identity:	160/276 - (57%)
Similarity:	210/276 - (76%)	Gaps:	2/276 - (0%)

- Green bases have known domain annotations that are detailed below.

  Fly    16 QLKEQGNCLFAARKYDDAINCYSKAIIKNPTNATYFTNRALCNLKLKRWELCCQDSRRALDIDGN 80
            :||||||.||..|||.:|..||.:||.:||..|.|:||||||.||:::.|....|.||||::||.
Mouse    29 ELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQ 93

  Fly    81 LLKGHFFLGQGLMEIDNFDEAIKHLQRAYDLSKEQKQNFGDDITLQLRLARKKRWNVMEEKRIQQ 145
            .:|.||||||..:|::::||||.:|||||.|:|||:.||||||...||:|:|||||.:||:||.|
Mouse    94 SVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWNSIEERRIHQ 158

  Fly   146 EIELQSYLNGLIKGDMESRLANLKLN--GNVHDEQLKDKQQEIEQECDDHIKELNNIFSKVDERR 208
            |.||.|||..||..:.|..|...:.|  |:..|..::.:|..||.:.|.::.:::.:||:|||:|
Mouse   159 ESELHSYLTRLIAAERERELEECQRNHEGHEDDGHIRAQQACIEAKHDKYMADMDELFSQVDEKR 223

  Fly   209 KKREVPDFLCGKISFEILTDPVITPSGITYERKDIEEHLQRVGHFDPVTRVKLTQDQLIPNFSMK 273
            |||::||:||||||||::.:|.||||||||:|||||||||||||||||||..|||:|||||.:||
Mouse   224 KKRDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNLAMK 288

  Fly   274 EVVDSFIAENEWSLDY 289
            ||:|:||:||.|..||
Mouse   289 EVIDAFISENGWVEDY 304

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.