Protein Alignment STUB1 and rpap3

DIOPT Version :10

• Sequence 1: NP_477441.1
• Gene: STUB1 / 34433
• FlyBaseID: FBgn0027052
• Length: 289
• Species: Drosophila melanogaster
• Sequence 2: NP_956498.2
• Gene: rpap3 / 393173
• ZFINID: ZDB-GENE-040426-928
• Length: 595
• Species: Danio rerio
• Alignment Length: 241
• Identity: 61/241 - (25%)
• Similarity: 96/241 - (39%)
• Gaps: 59/241 - (24%)

  Fly    14 DLQL--KEQGNCLFAARKYDDAINCYSKAIIKNPTNATYFTNRALCNLKLKRWELCCQDSRRALD 76
            ||.|  ||:||..|...::|.||.||:||:..:|.|....||||.|..:||::.:...|...|:.
Zfish   126 DLALAEKEKGNQFFKDGRFDSAIECYTKAMDADPYNPVPPTNRATCFYRLKKFAVAESDCNLAIA 190

  Fly    77 IDGNLLKGHFFLGQGLMEIDNFDEA--------------------IKHLQRAYDLSK-------- 113
            :|...:|.:.........:....||                    ::.||:..:.||
Zfish   191 LDSKYVKAYIRRAATRTALQKHREALEDYEMVLKLDPGNSEAQTEVQKLQQELNSSKQTEETEEK 255

  Fly   114 ---------EQKQNFGDDITLQLRLARKKRWNV-MEEKRIQQEIELQSYLNGLIKGDMESRL--- 165
                     ||:|...:....|..:..|.|.|. .:|.|  .|:.::||..|:...:..:.|
Zfish   256 RESITEPTAEQQQRLQEQQRKQEAVMHKDRGNAYFKEGR--YEVAVESYTRGMEADETNALLPAN 318

  Fly   166 ---ANLKLNGNVHDEQLKDKQQEIEQECDDHIKELNNIFSKVDERR 208
               |.||||          :..|.||:|...: .|:..::|...||
Zfish   319 RAMAFLKLN----------RFAEAEQDCSAAL-ALDPSYTKAFARR 353

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
STUB1	NP_477441.1	TPR repeat	17..42	CDD:276809	13/26 (50%)
		TPR	21..>111	CDD:440225	27/109 (25%)
		TPR repeat	47..77	CDD:276809	10/29 (34%)
		TPR repeat	82..110	CDD:276809	5/47 (11%)
		CHIP_TPR_N	130..211	CDD:436460	23/86 (27%)
		RING-Ubox_CHIP	213..283	CDD:438316
rpap3	NP_956498.2	TPR	124..407	CDD:440225	61/241 (25%)
		TPR repeat	128..156	CDD:276809	13/27 (48%)
		TPR repeat	161..191	CDD:276809	10/29 (34%)
		TPR repeat	196..224	CDD:276809	3/27 (11%)
		TPR repeat	279..307	CDD:276809	9/29 (31%)
		TPR repeat	312..342	CDD:276809	10/40 (25%)
		TPR repeat	347..375	CDD:276809	3/7 (43%)
		RPAP3_C	476..566	CDD:464012