DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment STUB1 and Dpit47

DIOPT Version :10

Sequence 1:NP_477441.1 Gene:STUB1 / 34433 FlyBaseID:FBgn0027052 Length:289 Species:Drosophila melanogaster
Sequence 2:NP_525106.2 Gene:Dpit47 / 35565 FlyBaseID:FBgn0266518 Length:396 Species:Drosophila melanogaster


Alignment Length:260 Identity:50/260 - (19%)
Similarity:88/260 - (33%) Gaps:90/260 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LQLKEQGNCLFAARKYDDAINCYSKAIIKNPTN----ATYFTNRALCNLKLKRWELCCQDSRRAL 75
            |..||.||.....:|:..||..:::.|.....|    |..:.||:..:..:|.:.....|::|||
  Fly    92 LNYKEDGNFYMKHKKFRMAIYSFTEGIKTKTDNPDVLAVLYNNRSAAHFFIKNYRSSLSDAQRAL 156

  Fly    76 DIDGNLLKGHFFLGQGLMEIDNFDEAIKHLQRAYDLSKEQKQNFGDDITLQLRLARKKRWNVMEE 140
            ....:..|..:...|...|::.||...:                                 :.||
  Fly   157 FYKPDYTKARWRSAQCAYELERFDLCTQ---------------------------------MCEE 188

  Fly   141 KRIQQEIELQSYLNGLIKGDMESRLANLKLNGNVHDEQLKDKQQEIEQECDDHIKELNNIFSKVD 205
                           |::.|:::.:|...|:.|      |.|:.||                   
  Fly   189 ---------------LLEVDVDNEVAIALLHKN------KMKKLEI------------------- 213

  Fly   206 ERRKKREVPDFLCGKISFEILTDPVITPSGITYERKDIEEHLQRVGHFDPVTRVKLTQDQLIPNF 270
            ||.:::|..:.......|..|.|.:        |::.|:...|:||..|     .|:::.|.|.|
  Fly   214 ERNQRKEAAEAKRRLTRFHRLRDAI--------EQRAIKFDDQKVGKKD-----VLSEELLYPKF 265

  Fly   271  270
              Fly   266  265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
STUB1NP_477441.1 TPR repeat 17..42 CDD:276809 7/24 (29%)
TPR 21..>111 CDD:440225 20/93 (22%)
TPR repeat 47..77 CDD:276809 9/33 (27%)
TPR repeat 82..110 CDD:276809 5/27 (19%)
CHIP_TPR_N 130..211 CDD:436460 13/80 (16%)
RING-Ubox_CHIP 213..283 CDD:438316 13/58 (22%)
Dpit47NP_525106.2 3a0801s09 84..>179 CDD:273380 21/86 (24%)
TPR repeat 91..119 CDD:276809 8/26 (31%)
TPR repeat 124..158 CDD:276809 9/33 (27%)
TPR repeat 163..191 CDD:276809 8/75 (11%)
TPR repeat 197..227 CDD:276809 10/54 (19%)
CTWD_Cns1 232..387 CDD:439174 12/47 (26%)

Return to query results.
Submit another query.