DRSC/TRiP Functional Genomics Resources

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Protein Alignment STUB1 and Ttc12

DIOPT Version :10

Sequence 1:NP_477441.1 Gene:STUB1 / 34433 FlyBaseID:FBgn0027052 Length:289 Species:Drosophila melanogaster
Sequence 2:NP_766358.1 Gene:Ttc12 / 235330 MGIID:2444588 Length:704 Species:Mus musculus


Alignment Length:315 Identity:62/315 - (19%)
Similarity:126/315 - (40%) Gaps:78/315 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LKEQGNCLFAARKYDDAINCYSKAIIKNPTNATYFTNRALCNLKLKRWELCCQDSRRALDIDGNL 81
            |||:||..|....|:.||..||:.:.|.......:||||...:||..::....|...||..|.|.
Mouse   108 LKEKGNEAFVRGDYETAIFFYSEGLGKLKDMKVLYTNRAQAFIKLGDYQKALVDCDWALKCDENC 172

  Fly    82 LKGHFFLGQGLMEIDNFDEAIKHLQRAYDLSKEQKQNFGDDITLQLRLARKKRWNVMEEKRIQQE 146
            .|.:|.:|:..:.:.|:.:|.:..|:..:::.:.|....:.:. |:.|..|..   ::||..|:.
Mouse   173 TKAYFHMGKAHVALKNYSKAKECYQKIEEINPKLKAQVKEHLN-QVTLREKAD---LQEKEAQES 233

  Fly   147 IE------------LQS----------YLNGL-----IKGDMESRLANLKLNG--NVHDEQL--- 179
            ::            |::          |..|:     :..|...|.......|  .:.|.::   
Mouse   234 LDSGKNTAVTTKNLLETLSKPGQTPLFYAGGIEILTEMMADCTERTLFRTYGGFSTISDHEVIRR 298

  Fly   180 ------KDKQQEI---------EQECDDHIKELNNIFSKVDERRKKREVPDFLCGKISFEILTDP 229
                  ||..:|:         ::.|.|:.:....:.:..|   ..|.:|.|:..:|        
Mouse   299 CLFLTGKDAVEEVLCVSVLKLWQEVCVDNEENQRLLVTHPD---MARLLPSFMTSRI-------- 352

  Fly   230 VITPSGITYERKDIEEHLQRVGHFDPVTRVKLTQDQLIPNFSMKEVVD---SFIA 281
                  :..:::.::..||       :|:.:..::|:|.:..|.::.:   ||:|
Mouse   353 ------LVIQQQSLDLLLQ-------LTQTENGRNQVIKHLDMTQLCEALLSFLA 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
STUB1NP_477441.1 TPR repeat 17..42 CDD:276809 11/24 (46%)
TPR 21..>111 CDD:440225 26/89 (29%)
TPR repeat 47..77 CDD:276809 9/29 (31%)
TPR repeat 82..110 CDD:276809 6/27 (22%)
CHIP_TPR_N 130..211 CDD:436460 17/127 (13%)
RING-Ubox_CHIP 213..283 CDD:438316 12/72 (17%)
Ttc12NP_766358.1 PLN03088 104..>254 CDD:215568 37/149 (25%)
TPR 1 105..138 12/29 (41%)
TPR repeat 105..133 CDD:276809 11/24 (46%)
TPR repeat 138..168 CDD:276809 9/29 (31%)
TPR 2 139..172 10/32 (31%)
TPR 3 173..206 6/32 (19%)
TPR repeat 173..198 CDD:276809 5/24 (21%)

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