| Sequence 1: | NP_477441.1 | Gene: | STUB1 / 34433 | FlyBaseID: | FBgn0027052 | Length: | 289 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_620266.1 | Gene: | Stip1 / 192277 | RGDID: | 621599 | Length: | 543 | Species: | Rattus norvegicus |
| Alignment Length: | 290 | Identity: | 62/290 - (21%) |
|---|---|---|---|
| Similarity: | 105/290 - (36%) | Gaps: | 65/290 - (22%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 16 QLKEQGNCLFAARKYDDAINCYSKAIIKNPTNATYFTNRALCNLKLKRWELCCQDSRRALDIDGN 80
Fly 81 LLKGHFFLGQGLMEIDNFDEA-------IKHLQRAYDLSKEQKQNFGDDITLQLRLARKKRWNVM 138
Fly 139 EEKRIQQEIELQSYLNGLIKGDMESRLANLKLNGNVHDEQLKDKQQEIEQECDD-HIKELNNIFS 202
Fly 203 KVDERRKKREVPDFLCGKISFEILTDPVITP---------------------------SGITYER 240
Fly 241 KDIE---EHLQRVGHFDPVTRVKLTQDQLI 267 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| STUB1 | NP_477441.1 | TPR repeat | 17..42 | CDD:276809 | 13/24 (54%) |
| TPR | 21..>111 | CDD:440225 | 26/96 (27%) | ||
| TPR repeat | 47..77 | CDD:276809 | 5/29 (17%) | ||
| TPR repeat | 82..110 | CDD:276809 | 8/34 (24%) | ||
| CHIP_TPR_N | 130..211 | CDD:436460 | 14/81 (17%) | ||
| RING-Ubox_CHIP | 213..283 | CDD:438316 | 11/85 (13%) | ||
| Stip1 | NP_620266.1 | TPR 1 | 4..37 | 15/30 (50%) | |
| 3a0801s09 | <7..532 | CDD:273380 | 62/289 (21%) | ||
| TPR repeat | 7..32 | CDD:276809 | 13/24 (54%) | ||
| TPR repeat | 37..67 | CDD:276809 | 5/29 (17%) | ||
| TPR 2 | 39..71 | 5/31 (16%) | |||
| TPR repeat | 72..100 | CDD:276809 | 6/27 (22%) | ||
| TPR 3 | 73..105 | 8/31 (26%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 191..233 | 5/51 (10%) | |||
| Bipartite nuclear localization signal. /evidence=ECO:0000255 | 222..239 | 1/16 (6%) | |||
| TPR 4 | 225..258 | 6/32 (19%) | |||
| TPR repeat | 229..253 | CDD:276809 | 4/23 (17%) | ||
| TPR repeat | 258..288 | CDD:276809 | 1/11 (9%) | ||
| TPR 5 | 260..292 | 1/9 (11%) | |||
| TPR 6 | 300..333 | ||||
| TPR repeat | 300..328 | CDD:276809 | |||
| TPR 7 | 360..393 | ||||
| TPR repeat | 364..388 | CDD:276809 | |||
| TPR repeat | 393..423 | CDD:276809 | |||
| TPR 8 | 395..427 | ||||
| TPR 9 | 428..461 | ||||
| TPR repeat | 428..456 | CDD:276809 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||