DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment STUB1 and Stip1

DIOPT Version :10

Sequence 1:NP_477441.1 Gene:STUB1 / 34433 FlyBaseID:FBgn0027052 Length:289 Species:Drosophila melanogaster
Sequence 2:XP_319365.4 Gene:Stip1 / 1279608 VectorBaseID:AGAMI1_001647 Length:325 Species:Anopheles gambiae


Alignment Length:170 Identity:44/170 - (25%)
Similarity:74/170 - (43%) Gaps:14/170 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KEQGNCLFAARKYDDAINCYSKAIIKNPTNATYFTNRALCNLKLKRWELCCQDSRRALDIDGNLL 82
            ||:||..|....|..|:..||:||.:||.:|..::|||.|..||..::|..:|......:|...:
Mosquito   149 KEKGNEYFKQGDYSTAVKHYSEAIKRNPDDAKLYSNRAACYTKLAAFDLGLKDCETCCRLDETFI 213

  Fly    83 KGHFFLGQGLMEIDNFDEAIKHLQRAYDLSKEQKQNFGD--DITLQLRLARKKRW-NVMEEKRIQ 144
            ||....|:.|..:....||:...|:|.::.....:....  ..|:.:....|:.| ..|.:..:|
Mosquito   214 KGWIRKGKILQVMQKSSEALTAYQKALEIDPNNAEAL
EGYRACTMAVHADPKEVWKKAMNDPEVQ 278

  Fly   145 QEIELQSYLNGLIKGD-MESRLANLKLNGNVHDEQLKDKQ 183
            |          ::|.. |...|..::.:.....|.||:.|
Mosquito   279 Q----------ILKDPAMRVILEQMQNDPKAVQEHLKNPQ 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
STUB1NP_477441.1 TPR repeat 17..42 CDD:276809 10/23 (43%)
TPR 21..>111 CDD:440225 29/89 (33%)
TPR repeat 47..77 CDD:276809 9/29 (31%)
TPR repeat 82..110 CDD:276809 8/27 (30%)
CHIP_TPR_N 130..211 CDD:436460 12/56 (21%)
RING-Ubox_CHIP 213..283 CDD:438316
Stip1XP_319365.4 TPR repeat 14..38 CDD:276809
LapB 16..250 CDD:442196 31/100 (31%)
TPR repeat 43..73 CDD:276809
TPR repeat 85..113 CDD:276809
TPR repeat 145..173 CDD:276809 10/23 (43%)
TPR repeat 178..208 CDD:276809 9/29 (31%)
TPR repeat 213..241 CDD:276809 8/27 (30%)
STI1 264..317 CDD:436075 12/55 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.