DRSC/TRiP Functional Genomics Resources

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Protein Alignment holn1 and AT5G09390

DIOPT Version :10

Sequence 1:NP_609404.2 Gene:holn1 / 34432 FlyBaseID:FBgn0032250 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_568211.1 Gene:AT5G09390 / 830798 AraportID:AT5G09390 Length:351 Species:Arabidopsis thaliana


Alignment Length:285 Identity:63/285 - (22%)
Similarity:137/285 - (48%) Gaps:44/285 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASKRKHQASQ---KVKEESFKKHTLDSDEEDSDDYEREYLNDSDIEGGEEGVAKVEDDVKVTPF 62
            :|.::...|::   |::.::..|..::.|.:|.:..:..|.:|.:         :.||.:::..|
plant    48 LARRKARDAAKERAKIRNQNTTKLFIEDDSDDINQAQETYEDDGN---------RTEDGIQIEAF 103

  Fly    63 NMKEELEEGHFDKDGHY-HWNKETEAKDNWLDNIDWVKIGTQKNAFDPAKDEENSSDEEKNEPVG 126
            ::..|.|||:||.||:: .:.:|.|.||.|||:|:...:...::|.:..:.:::|.:|:..:.:.
plant   104 SLDREKEEGYFDADGNFVEYVREKEVKDAWLDSIEKNPMYMGRSAANDTEMDDDSGNEKAGDDLS 168

  Fly   127 KAFNLSMNLMKMVEFMKPGETVKMTLQRLGKQRPVLTTLQRIKQKKAGIVDPKTQE----ISQLT 187
            :. .:.:...::...::||||             ||..|:|:|.......:..|.|    ..|||
plant   169 QD-EIGVRKRRIANVLEPGET-------------VLRALRRLKGNSNNRKEKMTSETKLIFDQLT 219

  Fly   188 ELANEILSKTGNMDIYQDTYESIKAKIADLPGTSKPK---VADDI--DMYADDFETKELERSKTS 247
            |.|:::: :.|:.::|.:..|..:.:.......::.|   .|:.:  ||:.||      |.:...
plant   220 EDADKLI-ENGDYNVYHEEQEVFQREAEGYERLAQAKENGTANIVSCDMFGDD------ENAPEP 277

  Fly   248 SSDSSKPTTTTSEVTWEFKWSQDET 272
            ||| .:|:::.|.......:..||:
plant   278 SSD-LQPSSSISGTQLNSDYVFDES 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
holn1NP_609404.2 GYF 260..318 CDD:238027 2/13 (15%)
AT5G09390NP_568211.1 OCRE 294..342 CDD:304914 2/8 (25%)
OCRE repeat 1 294..301 CDD:293880 1/6 (17%)
OCRE repeat 2 302..309 CDD:293880 63/285 (22%)
OCRE repeat 3 310..317 CDD:293880
OCRE repeat 4 318..324 CDD:293880
OCRE repeat 5 326..333 CDD:293880
Blue background indicates that the domain is not in the aligned region.

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