DRSC/TRiP Functional Genomics Resources

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Protein Alignment holn1 and Cd2bp2

DIOPT Version :10

Sequence 1:NP_609404.2 Gene:holn1 / 34432 FlyBaseID:FBgn0032250 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_081629.1 Gene:Cd2bp2 / 70233 MGIID:1917483 Length:342 Species:Mus musculus


Alignment Length:325 Identity:109/325 - (33%)
Similarity:174/325 - (53%) Gaps:48/325 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 FK-KHTLDSDEEDSDD---YEREYLNDSDIEGGEEGVAKVEDDVKVTPFNMKEELEEGHFDKDGH 78
            || ||:|||||||.|:   .:.:.|...|:||.|......|..|::||||::||:||||||.||:
Mouse    41 FKGKHSLDSDEEDDDEEGSSKYDILASEDVEGQEAATLPSEGGVRITPFNLQEEMEEGHFDADGN 105

  Fly    79 YHWNKETEAKDNWLDNIDWVKIGTQKNAFDPAKDEENSSDEEKNEPVGKAFNLSMNLMK-MVEFM 142
            |..|::.:.:|:||||||||:|.      :...|:...||.|:.:.:|:....:..|:: ::|.:
Mouse   106 YFLNQDAQIRDSWLDNIDWVRIK------ERPPDKHQVSDSEEEDSLGQTPMSAQALLEGLLELL 164

  Fly   143 KPGETVKMTLQRLGKQ------------RPVLTTLQRIKQKKAGIVDPKTQEISQLTELANEILS 195
            .|.|||...|:|||.:            ||                 ...|.:.:|:.||:::::
Mouse   165 LPRETVAGALRRLGARGGGKGSNSKGTGRP-----------------NSPQRLDRLSGLADQMVA 212

  Fly   196 KTGNMDIYQDTYESIKAKIADL----PGTSKPKVADDIDMYADDFETKELER-SKTSSSDSSKPT 255
            : ||:.:||:|.|.:..::..|    .|:..|.....:||:|::....|||. :.|...::....
Mouse   213 R-GNLGVYQETRERLAMRLKGLGCRAQGSHDPTPPPSLDMFAEEVAEGELETPTPTQREEAESAG 276

  Fly   256 TTTSEVTWEFKW-SQDETDIQGPFSTEKMLKWSQENYFKNGVYVRKCG-ENTNFYTSNRIDFDLY 318
            ....:|.||:|| :..:.::.|||::.:|..|..|.||.:|||.||.. ....||.|.||||:||
Mouse   277 DGLMDVMWEYKWENTGDAELYGPFTSAQMQTWVSEGYFPDGVYCRKLDPPGGQFYNSKRIDFELY 341

  Fly   319  318
            Mouse   342  341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
holn1NP_609404.2 GYF 260..318 CDD:238027 25/59 (42%)
Cd2bp2NP_081629.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..64 12/22 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 130..150 5/19 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 177..200 5/39 (13%)
GYF 282..339 CDD:214666 24/56 (43%)

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