DRSC/TRiP Functional Genomics Resources

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Protein Alignment holn1 and cd2bp2

DIOPT Version :10

Sequence 1:NP_609404.2 Gene:holn1 / 34432 FlyBaseID:FBgn0032250 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_957255.1 Gene:cd2bp2 / 393936 ZFINID:ZDB-GENE-040426-925 Length:378 Species:Danio rerio


Alignment Length:356 Identity:124/356 - (34%)
Similarity:191/356 - (53%) Gaps:73/356 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 KKHTLDSDEEDS-DDYER----EYLNDSDIEGGEEGVAKVEDDVKVTPFNMKEELEEGHFDKDGH 78
            :||:|||||||. :|.:.    :.|...|:||.|......::.|::||||:.||::|||||.:|:
Zfish    39 EKHSLDSDEEDEVEDVDNSSKYDILASDDVEGQEGATIDYDEGVRITPFNLDEEMQEGHFDSEGN 103

  Fly    79 YHWNKETEAKDNWLDNIDWVK-------------------IGTQKNAFDPAKDEE--NSSDEEKN 122
            |..|||.:.:|||||||||||                   :|.:..|.:..|.||  |.|::|:.
Zfish   104 YFVNKEKDIRDNWLDNIDWVKVKEQPVKKKKGLAAKRKRRVGDEDEAEEEIKREEQRNDSEDEEE 168

  Fly   123 E--------PVGKAFNLSMNLMKMVEFMKPGETVKMTLQRL---------GKQRPVLTTLQRIKQ 170
            |        |:. |::.......::|.:.|||||...|:||         |:||       ..::
Zfish   169 EKEKEPAEDPLA-AYSHYQLTEAIIELLLPGETVSAALRRLGGLGGQKKKGRQR-------NGEE 225

  Fly   171 KKAGIVDPKTQEISQLTELANEILSKTGNMDIYQDTYESIKAKIA-DLPGTSKPKVA-------- 226
            :|....:....::.:||.||:.::. .|..:|||.|||    |:| .|.|.::.|.|        
Zfish   226 EKKEASNRDADKLDKLTALADRLVG-IGEFEIYQQTYE----KLAYQLKGMTRGKAAKTLGDEEE 285

  Fly   227 --DDIDMYADDFETKELERSKTSSSDSSKPTTTTSEVTWEFKW-SQDETDIQGPFSTEKMLKWSQ 288
              |::||:.|||:.|. :..|...:|:.|   .:.||.||:|| :::.:::.||||::::..|..
Zfish   286 DKDELDMFGDDFDEKH-DADKNEDNDNRK---VSDEVMWEYKWENKESSELYGPFSSQQVQDWVD 346

  Fly   289 ENYFKNGVYVRKCG-ENTNFYTSNRIDFDLY 318
            |.||.:|||.|:.| |..:||.|.|||||||
Zfish   347 EGYFNDGVYCRRIGQEGASFYNSKRIDFDLY 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
holn1NP_609404.2 GYF 260..318 CDD:238027 28/59 (47%)
cd2bp2NP_957255.1 GYF 317..377 CDD:238027 28/59 (47%)

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